Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04489 ATGAGGAAACAATATAGAAAGCTGGTTCATATGCTTCACCCTGATAATAACAAGTCCATTGGTGCAGATTGGGCTTTTAAACTAGTTTCGGAGGCATGGAATATACTATCGAATAAGGCTATAAGGTTAGCATATGATAAGATGATCGAGGCAAGGACAGATGCTGAAGAGATTAGCAATAAACCAAGTCAAATTAAGAAAGATTCTAATGACAAAACAACAGTAAAAGAGATCAGTGGAAATGACCACCAAAAAGCAAATGAGGAATGA 270 0.363 MRKQYRKLVHMLHPDNNKSIGADWAFKLVSEAWNILSNKAIRLAYDKMIEARTDAEEISNKPSQIKKDSNDKTTVKEISGNDHQKANEE. 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04489 89 ProSitePatterns Nt-dnaJ domain signature. 26 45 IPR018253 -
Seca10g04489 89 PANTHER BNAC03G44070D PROTEIN 2 48 - -
Seca10g04489 89 ProSiteProfiles dnaJ domain profile. 1 49 IPR001623 -
Seca10g04489 89 Gene3D DnaJ domain 1 88 IPR036869 -
Seca10g04489 89 MobiDBLite consensus disorder prediction 55 89 - -
Seca10g04489 89 CDD DnaJ 2 38 IPR001623 -
Seca10g04489 89 Pfam DnaJ domain 2 46 IPR001623 -
Seca10g04489 89 SUPERFAMILY Chaperone J-domain 2 52 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04489 Seca-Chr10 102275439 102275708 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04489 1 46 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.478 2.40e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04489 - - tpra:123911521 79.7221