Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04472 ATGATGCTTTGGTCTTTCTTAGGCAAGATACACGGAGGTTTCTCAGTATTCTTTACACACAGGAAATTAGAAGCACTCATCAGCAGCTTCAATGAAGATAGGGGAATGGAGGTGCCTACAGGTGATGTAATAGAAGGACACTTTGTAGTTTTTGCTAACAAGGATCAACTAACCAAACGGTTTGTTGTTGATTTGCACTATTTGCGTGACCCTGCTTTTCTAGGACTGCTGGAACGGGCAAAAGAAGAGTATGGCTTCAAACAGAAAGGGCCTCTGGTAATTCCATGCCATCCTCAAGAACTAGAGAACATTCTAGCTAGAAGGACAACATAG 333 0.4234 MMLWSFLGKIHGGFSVFFTHRKLEALISSFNEDRGMEVPTGDVIEGHFVVFANKDQLTKRFVVDLHYLRDPAFLGLLERAKEEYGFKQKGPLVIPCHPQELENILARRTT. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04472 110 Pfam Auxin responsive protein 38 106 IPR003676 GO:0009733
Seca10g04472 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04472 Seca-Chr10 101642425 101642757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04472 24 106 Calmodulin-binding Proteins AT4G34750 40.964 1.86e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04472 - K14488 gmx:100809715 143.665