Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04441 ATGTCAGAAGTGGTGTCATTTCTAAAAATCAAATCTAATGATGTCCGCATGGTTGGAATTTATGGAATTGGTGGCATTGGTAAAACAACAATTGCTCGAGCTGTGTATAACTCAATTACTAGTAAGTTTGATGGCTCAAGTTTTCTTGCTGATGTCAGAGAAAACTCAATGAAGCATGGTCTAGTACACCTACAAGAGACCCTTCTACTTCATTTGCTTGGAGAAAACATCAAGTTGAGTGATGTGAATGAAGGAATTCCTATAATAAAAAGAAGACTTCTTAGCAAGAAGGTTCTTTTGATTCTTGATGATGTGAATGATTTGCAACAATTGCAGTCATTGGCTGGAAGACATGATTGGTTTGGCTTTGGAAGCAGAATTATCATAACAACAAGAGATAAACAATTGTTAGCTACTCATGGGGTTGAAGAAACATATGAAGTGAAAGAATTGAATGATCATGAAGCTCTTGAGCTATTTAGTTTTAATGCTTTTAAAAGAAAGGAACCTGATGCAAGTTATGTGGAGATAACAAACCGAATAGTAAAATATGCCAAAGGTCTTCCATTAGCTTTGAATGTCATAGGATCTGATTTGTATGGCAAAACAATAGAAGAATGGGAAAGTGCACTAAAGAAATATGAAACAATCCCAAGCAAAAAGATTATAGATGTCCTTAAAGTAAGCTATGATAATTTGGATGATAATGAAAAAGAAATTTTCCTTGATATTGCATGTTTCTTCAAGGGAAATTTGAGAGAGGATGTAGAAAAGACATTAGATGCCTCTCGTTTTCAATCAAGATATGGCATTGGAGTACTTATTGACAAATCTCTAGTAAAAATTAGTGAATCCAATACACTTAAGATGCATGATCTTATACAAGACCTGGGTAGAGACATTGCTAGAAAGGATTCACCATTTGACCCTAGTAAACGCAGGAGACTATGGCATCATGAGGATGTTCTTGAAGTCTTGACAACAAATGCAGGAAATAATACAATTGAAGGCATAATGTTGGACATGCCCAACCTAAAACAAAAGGTTCAATTAAAGGCCAACACCTTTGATAATATGGGCAGACTTAGAATTCTCATAGTTCGGAATGCACAAGTTTCTGGAGCCCCAAAAAATCTCCCAAATAATTTGAGATTGCTTGAGTGGAATGAATATCCTTTACCATCTCTACCTGCTGATTTTCATCCAAAGACACTTGTTGTACTTAACTTGCCTAAGAGTCATCTTTCAATGGATGAGCCATTCAAGAAGTTTGAGCAATTGACTTTTATGAACTTCAGTGATAATGCCACTATAACAAAACTACCTGATGTATCTGAAACCCCAAATCTAACAAGAATACTTGTTAATAATTGTCCAAACTTGGTTGACATTCATGATTCTGTTGGACATCTTGACAAACTAGTCACATTGAGCACTACAGGGTGCCCCAAACTCAAGAGTTTTCCACGTGGCTTGAGATCAAAATCTCTTGAATACCTTAATCTCAGTAAGTCTCCTAACATTCAAAGTTTCCCAGATGTATTGGAAAAAGTGGAAAATATGAAGCAGATTGATATAGGAGGGACTTCCATAAAAAAATTCCCAAGTTCAATTCAAAACTTCAAAGGTCTTGAAGAACTAGTGTTGACATCTTGCCTAAGTTTTGAGGACCTACCAAGTAACACAAATATGTTTCAAAATATTGAAGAGCTTAATGTTGAAGGATGTCCACAACTTCCAAAAATTTTATGGAAGTCAGTAGAAGACAGGACTGATTGGCTTCCAAAGTTAAGTAGATTGAGCCTAAAAAATTGTGATCTAACAGATAAGGATCTTGAACTAATTCTTAATTGTTTTCTACAATTGAAGTGGTTGATCCTAGCAGATAATAACTTCTTGACCATCCCTGATTGCATTGAAGACCTTTCACACCTCTTGCTTCTTAATGTGAATAATTGCAAGCAGCTTAGAGATATTTCAGTGCTCCCACCATACTTGCAATACATAGATGCAAGGAATTGCATGTCACTGACTCCCCAGTCATCAGATGTAATATTAAGCCAGGCATTTCTGGAGGTTGAGTACATAGACATTGTGGTGCCAAGGAAAAAAATTCCAAGTTGGTTGGATCATTGTAGCAAAGGAGGGTCTGTGGCTTTCTGGGTTAAAAGAAAATTCCCTAAAATTGCTTTATTTTTTCTTTTAGGAGGTGAAGATGAAGGGAAAGTTGATTATACATGTGAATTTTGCTTGCTTATCAATGGAATCCAAGTATTCCAAGAAAGAAGAGAGTGGCCAGTTGATCATATATGGTTGTTTGATCTGCGAATTAGCCTCACAGCTAGTGAGTGGCAGAGCTTCAATGAACAAATAAAGTCTGGTTGGAATCAGGTTGAGATTTCATGTTCTGTCATGAATAAGCCAAAAGATGTAACTGTAAAATGTTGTGGAATTCATCTATACAAAGATAGAATGAACATCCACCATGTCTCCTTCATAAGTCCTGATCTTCATGGCTCAAATATGGCCCATGATAACTTACAAGACAATTTGGATATCTATGATGAAGCAAGAGGAGAAGTTGATTTCCCTACATTATTGGCTAAATATTTTACCAAAAATATGTTAGAGGTCATGGGAAATCTTCAAGCTAGCAAGGGAAAAGATGATAATGGGTATAGCTTTGATGAGGAGTTAGAACTTGATAGTGACACTGACATTGACAACCAGCACATGGAAGAGGAACAACATTCAGTGTCCCTGAATCATCAAATCCTAGAAAATTGTGAACTTATGAATAATGACAAAGGAAAAGGTTAG 2820 0.3606 MSEVVSFLKIKSNDVRMVGIYGIGGIGKTTIARAVYNSITSKFDGSSFLADVRENSMKHGLVHLQETLLLHLLGENIKLSDVNEGIPIIKRRLLSKKVLLILDDVNDLQQLQSLAGRHDWFGFGSRIIITTRDKQLLATHGVEETYEVKELNDHEALELFSFNAFKRKEPDASYVEITNRIVKYAKGLPLALNVIGSDLYGKTIEEWESALKKYETIPSKKIIDVLKVSYDNLDDNEKEIFLDIACFFKGNLREDVEKTLDASRFQSRYGIGVLIDKSLVKISESNTLKMHDLIQDLGRDIARKDSPFDPSKRRRLWHHEDVLEVLTTNAGNNTIEGIMLDMPNLKQKVQLKANTFDNMGRLRILIVRNAQVSGAPKNLPNNLRLLEWNEYPLPSLPADFHPKTLVVLNLPKSHLSMDEPFKKFEQLTFMNFSDNATITKLPDVSETPNLTRILVNNCPNLVDIHDSVGHLDKLVTLSTTGCPKLKSFPRGLRSKSLEYLNLSKSPNIQSFPDVLEKVENMKQIDIGGTSIKKFPSSIQNFKGLEELVLTSCLSFEDLPSNTNMFQNIEELNVEGCPQLPKILWKSVEDRTDWLPKLSRLSLKNCDLTDKDLELILNCFLQLKWLILADNNFLTIPDCIEDLSHLLLLNVNNCKQLRDISVLPPYLQYIDARNCMSLTPQSSDVILSQAFLEVEYIDIVVPRKKIPSWLDHCSKGGSVAFWVKRKFPKIALFFLLGGEDEGKVDYTCEFCLLINGIQVFQERREWPVDHIWLFDLRISLTASEWQSFNEQIKSGWNQVEISCSVMNKPKDVTVKCCGIHLYKDRMNIHHVSFISPDLHGSNMAHDNLQDNLDIYDEARGEVDFPTLLAKYFTKNMLEVMGNLQASKGKDDNGYSFDEELELDSDTDIDNQHMEEEQHSVSLNHQILENCELMNNDKGKG. 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04441 939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 244 IPR027417 -
Seca10g04441 939 PRINTS Disease resistance protein signature 640 656 - -
Seca10g04441 939 PRINTS Disease resistance protein signature 17 32 - -
Seca10g04441 939 PRINTS Disease resistance protein signature 185 199 - -
Seca10g04441 939 PRINTS Disease resistance protein signature 92 106 - -
Seca10g04441 939 Pfam NB-ARC domain 6 230 IPR002182 GO:0043531
Seca10g04441 939 Gene3D Ribonuclease Inhibitor 495 714 IPR032675 -
Seca10g04441 939 Gene3D Ribonuclease Inhibitor 329 494 IPR032675 -
Seca10g04441 939 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 560 IPR044974 GO:0006952
Seca10g04441 939 Gene3D - 1 144 IPR027417 -
Seca10g04441 939 SUPERFAMILY L domain-like 356 683 - -
Seca10g04441 939 SUPERFAMILY "Winged helix" DNA-binding domain 220 326 IPR036390 -
Seca10g04441 939 Gene3D - 150 234 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04441 Seca-Chr10 101023969 101028556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04441 1 603 WRKY Transcription Factor Family AT4G12020 34.189 6.82e-88 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04441 - - pcin:129293148 1197.57