Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04432 TCATTCATTCTTTGTTTGTTTGATTTTGAACATTCAACACCGACTCGATCTCCATCGATCCATATTCTCATAACCTTACTAACTGACCTTTCTTCTCTCATGGCTCATCTACCAACCTCTTCCTCTTTCTCTTCATTCACTTATGAAGTGTTTCTCAGCTTCAGGGGCGAGGATACTCGTTATAATTTTACTGGCAATCTCTACGACGCTCTATTTCGTAGGGGAATCCACACTTTCATGGATGAGGAGGAGCTTCAGAAAGGGGAGGAAATCACACCATCACTTCTCAAGGCCATTGAAGGGTCTAGGATTGCTATCATTGTGCTCTCTAAGAACTATGCATCTTCATCATTTTGCTTGAATGAACTTTCCAACATTCTTGATAGCATTAAGGGAAAGGGTCGACTGGTTTTGCCGGTATTTTATGACGTGGACCCTTCTCATGTACGAAAGCTGACCGGGACTTATGGAGAAGCAATAGCTAAGCATGAGGAGAGGTTTAAAGATGACATACAAAGATTGCAAAATTGGAAGATGGCTCTGCATAAAGTGGCTAATTTGTCCGGTTGGCATTTCAAGCTTGGGGATGGATATGAACACAAGTTCATTGCAAAGATCGTTGAACAAGTCTCGAGAGAGATTAAACCTGTTACTTTAGCTGTTCATAATTACCTAGTTGGACTCGAGACCAAAAAGCAACATGTAACATCTCTTTTAGATGTTGGGTCTGATGATAAAGTCCACATAGTAGGGATTCATGGAATTGGCGGTATAGGTAAAACAACCCTTGCTCGAGCAGTTTATAATTCGGTTGCTGACCATTTTGAAGGTATGTGTTTTCTTGAAAATGTTAGAGAAAATTCAAAGAAAGATGGATTGCCTCACATCCAAAATATCATCCTTTCTGAAATAGTCCGAGAGAAGGAAATTAAGTTAACAAATGTCAAACAAGGAATTTCAATAATACAACAGAGATTACAAAGCAAGAAGATTCTTTTGATTCTAGATGATGTTGACAAGCGAGAGCAATTAGAGGCTCTTGCTGAAAGACAATGCTTTGGTCCTGGTAGTAGAGTTATTATCACCACGCGGGAAAAATACTTGCTAACATATCATGAAGTTGAAAGTACATATGAGGTGAAGGAGCTGAACAAGAAAGATGCTTTTGAATTGCTTAAATGGAAAGCTTTTAAAACTGACAAAGTTTGTTCAAGTTATTTGGATATTTTAAACCGTGCAGTAACTTATGCTTCTGGCCTTCCGTTGGCTTTGGAAGTAATAGGTTCCCACTTGTTTAAGAAAAGTGTAGAAGAATGGGAATCTGCATTAGATCGGTATGAAAGGATTCCTAATAATGAGATCCAAAATATTCTTAAAGTAAGTTTTGATGCGTTGGATCAATCAGAAAAAAGTGTCTTTCTTGACATTGCTTGTTGTTTTAAAGGATACCGCTTGGAAAAGGTAGAAGGAATACTTCATGCTCATTATGGTGAGAGCAAGAAACATCACATAGGAGTGTTGGTCGAAAAATCTATTATAAAGATTGAGTTTGGTTGTGTGACATTACATGACTTGATAGAGGATATGGGGAAAGAAATTGTACGACAAGAATCACCAGAAAATCCTGGAAAACGGAGTAGATTATGGTTTTCTAATGATATAATTCAAGTTTTAGAAAAAAATTCGGGAACCGATAAAATTGAAATCATACACATGAATTATTCCCCAGTAGAAATAAAATGGGATGGAGAGGCTTTGAAGAAGATGGTAAACCTCATAAAATGGGATGGAGAGGCTTTGAAGAAGATGGAAAACCTCATAAAATTGAAGAAGATGGAAAACCACAGGAGATGGGATGGAGAGGCTTTGAAGAAGATGGAAAACCTTATAAAATGGGATGGAGAGGCTTTGAAGAAGATGGACAACCTCAGAACACTTATTGTTAGAGATGGTGGTTTTTCCGAAAATCCAAAATATCTTCCAAAATGCTTAAGAGTGCTGGAATGGCGATCACGTAATCTACCATTTGATTTTCATATGATGAAGTTCGAGGACATGAGAGTTTTAAATATATATGACTGTGAATTAAGACAGATACCTGACATATCTGGTCTCCCAAACTTAGAAGAATTTTCATTTGAAAATTGGAATAATTTAACTGAAATTCACAAATCGGTTGGGTTATTAGGTAAACTTAAAATCTTGAGTGCCCAAGGTTGCAGCAAGCTGAGGAGTTTTCCACCCCTGGAATTGCCCTCTCTTGAACAACTCAATCTTTCAGATTGTTATAGTCTTGAGAGTTTTCCACCTGGGCTTGGGTTGTTGGGAAAACTGAAAATCTTAAGAGCTTCATATTTCGACAAGCTCAAGAGTTTTCCACCACTAGAGTTAACCTCTCTTGAACAACTGTATCTTTCATATTGTGATAATCTTGAGAGTATTTCACCCATGGTTGGGTCACTGGATAAACTCAAAATCTTGGATGTTGTAGGTTGCAAGAAGCTCAGGAGTTTTCCACCACTCAAACTGCCCTCTCTTGAAGTGCTCAAACTTTCATATTGTAGTAGTCTTGAGAGCTTTCCAGAAATATTAGGAAAGATGGGTAATATAACACACCTTCGCTTGCAAAACACTCCCATAAAAGAATTGCCATATTCATTTCAAAATCTTACTAGGCTCCAAACATTATATATGGAGAAATGTGGGATGGTTCAGCTACCAAGTAGCATTGTCATGATGTTAGAACTGGCAAAGCTTACCATTAAGGATGGGGGATGGCTACTCCCAAGACAAGAGGGTGGAGAAAAAGTTAGCTCAATGCATTCTTCAAAAGTAGAATTTCTTCAGCTCTTGAACTGCAACCTTTATGGGTCTTTGGCAATAGGTTTCAAGTGGTTTGCTAATGTGAAAGAATTAGACCTATCAGGGAATCAATTCAAAATTCTTCCTGAATGCATCAAAGAATTCCACTTTTTATGGATGCTTAGAATGGATAAGTGCAAGGAACTTCAGGAAATTGGAGGGCTTCCACCAAGCTTAAAATCTCTTAGTTTGGATTATTGCGAGCAACTTGAGGAAATTAGAGAGATTCCGCCGAGCTTAAAAACTTTCTCAGCCTTAAACTGTTCATCCTTGACTTCCTCATGCAAACGCAAGTTATTGAATCAGGAACTGCATGAGGCTAGAAAGACCAATTTTCGTCTGCCACAATCATTCAATGTTCCACACTGGTTCGATCACCAGAGAAATAAACAATCAATTTCTTTCTTGTTTCGTAATAAATTCCCTGCCTTAATTCTCTGTGTTGCTACAAAGACATGGAGGCACTATGGTTCTATAATTGTAACCGTCAATGGCAGATCATTTTCCTATAAGGATTCAGAGCATAAAGAAAAGCCGTTTGAATCAGATCATCATTTGCATCTTTTTCATATGCAAATGGAAAATTTCAATGATAATATGGAAATAGCACTTTTAGAAGATGAGTGGAACCTTGCAGAGGTTAGGATAGATGATAAATCCCTAATCCGTATGTGGGGAATCCATGTATTGAAAAAGAAAAGTAGCATAGAGGATATTCGACTCACCGATGAGAGATCTCCCATAATAGAATTGCCATTTTCATTTCAAAATCTTTGTCGGCTCCAAATATTACATTTGGGTGATTGTGGAATTGTTCAGGTACCAAGTAGCATTGTCATGTTGCGAAATTTGGCTAAGCTTACCATTGAGAATGGGGGATGGCTATTCCCAAAACAAGATGAGGGTGAAGAAAACAGGAGCGTGATGTTGTCTTCAAATGTAAAATGTCTTCATCTCAAAAGATGCTTCCTTTTAGAAGAATCTTTGGCAATAGGTCTCAAGTGGTTTGCTAATGTGAAAGAATTAGACCTATCAGAGAGTCAATTCGCAATTCTTCCTGAATGCATCAAAGAATGGGCTTTTCTACAAAAGCTCAATTTAAATTACTGCAGGGAACTTCAGGAAATTAGAGGGATTCCACCAAGCTTAAAATCTCTTAGTTTGGATAATTGCAGGGAACTTCAGGAAATTGGAGAGATTCCACCAAACTTAGAATCTCTTAGTTTGGATAATTGCAAGAAACTTAAGCAAATTAGTGGGATTCCACGAAGCTTAAAAACTTTCTCTGCATTAAATTGCCAATCCTTGACTTCCTCTTTGAAAAGCGAGTTACTGAATCAGGAACTGCATGAGGCTGGAAACACCTGGTTCCGTTTGCCACGAGTTTGGATTCCAGAGTGGTTTGGCCACAGGTGCATGCAAGGACTGTCAATTTCTTTGTGGTTTCGTAACAAGTTCCCTGCCATAGTTCTCAGTGTTGTCTCTCCATTAACATGGAAACGCTCTCATATATTCGTGACCATCAATGGCAATAAATTTTCTTGTAGAATTCCTGGGAATGAATATTTGCGTCCAGAAACGTATCATTTACATCTTTTTCATATGCAAATGGAAAATTTTGATGACAATCTAGACAAAGCACTTCTAGAAAATAAGTGGAACCACATGGAGGTTGACTTTACATTCGCATTCCAGCAAAGTGGAATCCATGTGTTGAAAGAGAAAAGTAGCATGGAGGATATTCGATTCACAGATCCTCATAAAAAGAGAAAATTAGATGCTGATCTCAATTGTCCACAATCATAA 4668 0.3792 SFILCLFDFEHSTPTRSPSIHILITLLTDLSSLMAHLPTSSSFSSFTYEVFLSFRGEDTRYNFTGNLYDALFRRGIHTFMDEEELQKGEEITPSLLKAIEGSRIAIIVLSKNYASSSFCLNELSNILDSIKGKGRLVLPVFYDVDPSHVRKLTGTYGEAIAKHEERFKDDIQRLQNWKMALHKVANLSGWHFKLGDGYEHKFIAKIVEQVSREIKPVTLAVHNYLVGLETKKQHVTSLLDVGSDDKVHIVGIHGIGGIGKTTLARAVYNSVADHFEGMCFLENVRENSKKDGLPHIQNIILSEIVREKEIKLTNVKQGISIIQQRLQSKKILLILDDVDKREQLEALAERQCFGPGSRVIITTREKYLLTYHEVESTYEVKELNKKDAFELLKWKAFKTDKVCSSYLDILNRAVTYASGLPLALEVIGSHLFKKSVEEWESALDRYERIPNNEIQNILKVSFDALDQSEKSVFLDIACCFKGYRLEKVEGILHAHYGESKKHHIGVLVEKSIIKIEFGCVTLHDLIEDMGKEIVRQESPENPGKRSRLWFSNDIIQVLEKNSGTDKIEIIHMNYSPVEIKWDGEALKKMVNLIKWDGEALKKMENLIKLKKMENHRRWDGEALKKMENLIKWDGEALKKMDNLRTLIVRDGGFSENPKYLPKCLRVLEWRSRNLPFDFHMMKFEDMRVLNIYDCELRQIPDISGLPNLEEFSFENWNNLTEIHKSVGLLGKLKILSAQGCSKLRSFPPLELPSLEQLNLSDCYSLESFPPGLGLLGKLKILRASYFDKLKSFPPLELTSLEQLYLSYCDNLESISPMVGSLDKLKILDVVGCKKLRSFPPLKLPSLEVLKLSYCSSLESFPEILGKMGNITHLRLQNTPIKELPYSFQNLTRLQTLYMEKCGMVQLPSSIVMMLELAKLTIKDGGWLLPRQEGGEKVSSMHSSKVEFLQLLNCNLYGSLAIGFKWFANVKELDLSGNQFKILPECIKEFHFLWMLRMDKCKELQEIGGLPPSLKSLSLDYCEQLEEIREIPPSLKTFSALNCSSLTSSCKRKLLNQELHEARKTNFRLPQSFNVPHWFDHQRNKQSISFLFRNKFPALILCVATKTWRHYGSIIVTVNGRSFSYKDSEHKEKPFESDHHLHLFHMQMENFNDNMEIALLEDEWNLAEVRIDDKSLIRMWGIHVLKKKSSIEDIRLTDERSPIIELPFSFQNLCRLQILHLGDCGIVQVPSSIVMLRNLAKLTIENGGWLFPKQDEGEENRSVMLSSNVKCLHLKRCFLLEESLAIGLKWFANVKELDLSESQFAILPECIKEWAFLQKLNLNYCRELQEIRGIPPSLKSLSLDNCRELQEIGEIPPNLESLSLDNCKKLKQISGIPRSLKTFSALNCQSLTSSLKSELLNQELHEAGNTWFRLPRVWIPEWFGHRCMQGLSISLWFRNKFPAIVLSVVSPLTWKRSHIFVTINGNKFSCRIPGNEYLRPETYHLHLFHMQMENFDDNLDKALLENKWNHMEVDFTFAFQQSGIHVLKEKSSMEDIRFTDPHKKRKLDADLNCPQS. 1556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04432 1555 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 771 IPR044974 GO:0006952
Seca10g04432 1555 SUPERFAMILY "Winged helix" DNA-binding domain 452 559 IPR036390 -
Seca10g04432 1555 Gene3D - 47 212 IPR035897 -
Seca10g04432 1555 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 476 IPR027417 -
Seca10g04432 1555 SMART LRR_typ_2 1212 1235 IPR003591 -
Seca10g04432 1555 SMART LRR_typ_2 966 989 IPR003591 -
Seca10g04432 1555 SMART LRR_typ_2 867 889 IPR003591 -
Seca10g04432 1555 SMART LRR_typ_2 797 821 IPR003591 -
Seca10g04432 1555 SMART LRR_typ_2 751 775 IPR003591 -
Seca10g04432 1555 SMART LRR_typ_2 705 729 IPR003591 -
Seca10g04432 1555 Pfam TIR domain 48 217 IPR000157 GO:0007165
Seca10g04432 1555 Gene3D Ribonuclease Inhibitor 543 859 IPR032675 -
Seca10g04432 1555 SUPERFAMILY L domain-like 941 1245 - -
Seca10g04432 1555 SUPERFAMILY L domain-like 630 914 - -
Seca10g04432 1555 Pfam NB-ARC domain 229 462 IPR002182 GO:0043531
Seca10g04432 1555 ProSiteProfiles TIR domain profile. 46 214 IPR000157 GO:0007165
Seca10g04432 1555 Gene3D Ribonuclease Inhibitor 860 1065 IPR032675 -
Seca10g04432 1555 Gene3D Ribonuclease Inhibitor 1163 1405 IPR032675 -
Seca10g04432 1555 Gene3D - 213 377 IPR027417 -
Seca10g04432 1555 SUPERFAMILY RNI-like 1179 1400 - -
Seca10g04432 1555 Gene3D - 382 466 IPR042197 -
Seca10g04432 1555 PRINTS Disease resistance protein signature 249 264 - -
Seca10g04432 1555 PRINTS Disease resistance protein signature 325 339 - -
Seca10g04432 1555 PRINTS Disease resistance protein signature 841 857 - -
Seca10g04432 1555 PRINTS Disease resistance protein signature 417 431 - -
Seca10g04432 1555 FunFam Disease resistance protein (TIR-NBS-LRR class) 44 216 - -
Seca10g04432 1555 SUPERFAMILY Toll/Interleukin receptor TIR domain 38 190 IPR035897 -
Seca10g04432 1555 SMART till_3 47 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04432 Seca-Chr10 100827306 100832654 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04432 775 921 WRKY Transcription Factor Family AT4G12020 40.667 6.50e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04432 - - mtr:25479587 1001.89