Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04375 ATGGTGTTGGATATCCCTGAAGATAAAGAGGCTCAATGGAATGACGAGGTGTTTGGAAAGATGGAGAGCCTCAAGATGCTTATAAAAAAGAAAGATTGCTTTTTGGAAAGCCCCAAACATCTCCCGAGCAGTTTGAGAGTGTTGGAATGGTGGGGATATCCTGAAGCTTCTTTACCATCTAATTTTCTTCCAAAGAATCTTATCATACTCAACTTGTCACACAGTTTCTTTCAATGGGACAAACCAATAGAGGCACGTATAATTATTACCATTAAGTCAGAGGTTGAGTCATTTGATCTTCACAGGTTGTTCAGTGCTAAAGGATGTACCAAGCTAAGGATTCTTCCGCGTTGTATAAAATTGAAATCTCTAAAATATCTTTGCCTTCGTGAATGCAACAGTCTTGTTACTTTTTCAGAAATATTAGAACCAATGAAGAACCTTGAATTTGTTGACTTGGAAGGAACTGCCATAAAAAATTGTCCAATTTCAATGCAGGAACCGACGGGGATAATTGATGGAGCATTCATGTGTCATCAAGCAATGGTTTCAGGAGAATCATCTCAAGCCCCAAGTCTCACTTCATCAAGTGTCCAAGTAAGACCAGAGGATGCATTAAAAACAGTCCAAGACTTCATCTCTGGTGATGCTAAATATTTGTTGGATTCTAAATTGTGCAATGCCATGGAAATCAGCCTAGAGTGCCTCTCCAATTTGTCTGCAGATAGTGATATATCATCTGAAATACTTGCTCAGTTAGAAGCTAGTTTGGAAACTAATAAGAAGCTGCAGCGAGAAGTTGGTTTCTTGGAAAGACAACTGCTTCATGACTTAGCTTGCATGGAGAAAAGAATAGAGGATCTTGAAGGTCAAATCGATGGCATTAATGCTAGCATGTCTGCTTGTCAACTAGAAAAGGATATAGCTGTAGAGAGTAAGAGATATATCTTTGAGGAAGGAATAACACTTACAACTCAAAGAGATGATTTGAAGGAAAAAGAATCTGATTTGCAAATTGATCTTGCTTCGGCAAAGGAAGTAAAAAAGAGAATCCAAGCTGAATGGACAGAACTTAGAAAAAAATTTAACAAGACTACTGAGTTCAATGTAGTAGCAAATGATAAGCATCCAAGCACCTTCAACCTGGAGATATCAGGTGATATGTACACCATATATAACCTCAAAGGGGCACTTTCCTAA 1200 0.3817 MVLDIPEDKEAQWNDEVFGKMESLKMLIKKKDCFLESPKHLPSSLRVLEWWGYPEASLPSNFLPKNLIILNLSHSFFQWDKPIEARIIITIKSEVESFDLHRLFSAKGCTKLRILPRCIKLKSLKYLCLRECNSLVTFSEILEPMKNLEFVDLEGTAIKNCPISMQEPTGIIDGAFMCHQAMVSGESSQAPSLTSSSVQVRPEDALKTVQDFISGDAKYLLDSKLCNAMEISLECLSNLSADSDISSEILAQLEASLETNKKLQREVGFLERQLLHDLACMEKRIEDLEGQIDGINASMSACQLEKDIAVESKRYIFEEGITLTTQRDDLKEKESDLQIDLASAKEVKKRIQAEWTELRKKFNKTTEFNVVANDKHPSTFNLEISGDMYTIYNLKGALS. 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04375 399 SUPERFAMILY L domain-like 2 164 - -
Seca10g04375 399 Coils Coil 253 298 - -
Seca10g04375 399 Coils Coil 327 347 - -
Seca10g04375 399 Gene3D Ribonuclease Inhibitor 4 176 IPR032675 -
Seca10g04375 399 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 274 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04375 Seca-Chr10 99450451 99452259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04375 41 169 WRKY Transcription Factor Family AT5G45050 30.496 1.13e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04375 - - vum:124829269 156.762