Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04360 ATGCTTATTGCTGAAGAGCTTCAACATTTGAGAAACAGTCTACCTGATCACGTTGTTGTTCAGCGGATAGAAGAAAGATTGTCTGCTCTAGGAAATTGTATAGCATGTAATGACCATGTGGCCCTCACTCACACTGATCTTGACAGGGAGACTGAGGAGATGATTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACGATTGCTGGTAATATTCTTGTTGGTAGTTACTGTGCCTTCTCCAATAGAGGTGGTTTGGTCCACCCTCATACTTCCATAGAAGACTTGGATGAACTTTCTACACTTCTTCAGGTTCCTTTGGTGGCTGGGACGGTGAACCGGGGAAGTGAAGTAATAGCTGCTGGAATGACAGTTAATGATTGGACAGCATTTTGTGGTTCAGACACCACTGCAACAGAGCTCTCTGTTATTGAGAGTGTTTTCAAGCTGAGGGAAGCACAACCTAGTGCCATTGTGGACGAGATGAGGAAATCGCTTATTGACAGCTATGTCTGA 516 0.4438 MLIAEELQHLRNSLPDHVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLIDSYV. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04360 171 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 4 170 IPR002769 GO:0042256|GO:0043022
Seca10g04360 171 SMART eIF6neu2 1 130 IPR002769 GO:0042256|GO:0043022
Seca10g04360 171 Pfam eIF-6 family 4 129 IPR002769 GO:0042256|GO:0043022
Seca10g04360 171 Gene3D - 1 151 - -
Seca10g04360 171 SUPERFAMILY Pentein 3 150 - -
Seca10g04360 171 Hamap Translation initiation factor 6 [eif6]. 1 171 IPR002769 GO:0042256|GO:0043022
Seca10g04360 171 NCBIfam translation initiation factor IF-6 5 150 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04360 Seca-Chr10 99023283 99024661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04360 5 171 Eukaryotic Initiation Factors Gene Family AT3G55620 89.820 7.07e-113 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04360 K03264 - jre:108979950 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04360 10 99023283 99024661 Seca8g06065 8 154278631 154287758 PCT