Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04359 ATGGCAACTAGACTTCAATTTGAGAATTCTTGTGAAGTTGGAGTGTTCTCTAAACTTACCAATGCCTATTGTTTGGTTGCCATTGGAGGTTCTGAAAACTTCTACAGTGTATTTGAAGCTGAGTTCGCAGATGTTATCCCTGTGGTCAAGACATCCATTGGTGGCACTCGTATTATTGGTCGTCTTTGTGCTGGAAACAAGAATGGGCTCCTCTTGCCCCATACCACCACAGACCAAGGTGATTCCTATTTTTGTTCTGTTTGTTTTGATTCTTAG 276 0.4167 MATRLQFENSCEVGVFSKLTNAYCLVAIGGSENFYSVFEAEFADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQGDSYFCSVCFDS. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04359 91 Gene3D - 1 86 - -
Seca10g04359 91 SMART eIF6neu2 3 87 IPR002769 GO:0042256|GO:0043022
Seca10g04359 91 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 81 IPR002769 GO:0042256|GO:0043022
Seca10g04359 91 SUPERFAMILY Pentein 1 82 - -
Seca10g04359 91 Pfam eIF-6 family 4 79 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04359 Seca-Chr10 99020661 99022592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04359 1 79 Eukaryotic Initiation Factors Gene Family AT3G55620 92.405 1.02e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04359 K03264 - cpap:110825086 157.918