Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04353 ATGGAGGTAGAAAATACTATATTTGTGGAAGAGAATGAAGAGCTTGAAAAATCTTTAGTTGATATTGATGAGCAAATTCCAAAGGTTGGTATGATATTGGAGTCTGAAGAGGAGCTTCATGCTTTTTATAAGAAATATGCCTATGAAGTTGGATTTGGGGTTCGAAAATTTAGCACAAGAACGGATGGTAAAGTCAAATATTATTCTCTTGGATGTTCCAAAGGAGGTAAATATGTAAGTAGAGCAAGTTCTTCTAAGTTTAGATTGTCTAGCAAAACTGAATGTCAAGCAAAAATTTTTGTGATTGTTCATAGTAGTGGAAATTGTACTATTTTTCGTGTTAATCTAGAGCAAATCATGCTTTATGTCCAAAAAAATCAAGATTTCAAAGGTCCCATAAGAAAATGA 408 0.3235 MEVENTIFVEENEELEKSLVDIDEQIPKVGMILESEEELHAFYKKYAYEVGFGVRKFSTRTDGKVKYYSLGCSKGGKYVSRASSSKFRLSSKTECQAKIFVIVHSSGNCTIFRVNLEQIMLYVQKNQDFKGPIRK. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04353 135 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 117 - -
Seca10g04353 135 Pfam FAR1 DNA-binding domain 42 116 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04353 Seca-Chr10 98762518 98762925 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g04353 FAR1 3.8e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04353 - - ecad:122587955 110.923