Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04328 ATGGCTAATTTGCTTACAGTGTTTTTCATCATGGAGGTGATAGTGAGTGGTTTAAGATTTGGAGTAGATGGTTTGAACATGAACTACTACTTGTTGAGCTGCCCTTTTGTTGACTCTGTTGTTAAGAGCAAAGTCAACAGTGCTCTGCAGAATGATCCCACTCTAGCAGCAGGTCTAGTTAGAATGCACTTTCATGACTGTTTCATAGAGGGATGTGATGGGTCAGTTCTGATTGACTCCACTAAGGATAACACAGCAGAAAAGGATTCACCAGCAAATTTGAGCTTGAGAGGCTATGAGGTCATAGATGACATCAAGGAAGAGCTTGAAAAAAGATGCCCTGGAGTGGTTTCATGCTCTGATATTCTTGCTATGGCTGCAAGAGATGCAGTTTTCTTTGCTGGGGGTCCAGTGTATGACATACCAAAAGGAAGGAAGGATGGAACAAGGTCCAAAATTGAGGACACTTTCAATCTGCCACCCCCCATCTTCAATGCTTCTCAGCTGATCAGGATGTTTGGACAGCATGGGTTTTCTGCAAAAGATATGGTGGCTCTCTCTGGAGCTCACACATTAGGGGTGGCAAGGTGTGCTTCTTTCAAGAACAGACTGACCCAAGGGGATCCAACTTTGGACTCAGAATTTGCAAAGACTCTCTCCAAAACATGCAACGCTGGCGACAATGCAGAGCAACCCTTTGATGCCACAAGGAACGATTTTGATAACTTATACTTCAACTCATTGGTAACAAACAATGGGGTTCTTACATCAGACCAAACATTGTACACTAGCCCACAAACGAGGAACATTGTGAACATTTATGCAAGGAACCAGGCCTTGTTTTTCTTGGATTTTCAACAGGCAATGGTGAAGATGAGCATGCTCGATGTCAAAGAAGGTTCCAAAGGGGAAGTTCGAAAAAATTGCCATAAAATAAACTGA 942 0.431 MANLLTVFFIMEVIVSGLRFGVDGLNMNYYLLSCPFVDSVVKSKVNSALQNDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPANLSLRGYEVIDDIKEELEKRCPGVVSCSDILAMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTFNLPPPIFNASQLIRMFGQHGFSAKDMVALSGAHTLGVARCASFKNRLTQGDPTLDSEFAKTLSKTCNAGDNAEQPFDATRNDFDNLYFNSLVTNNGVLTSDQTLYTSPQTRNIVNIYARNQALFFLDFQQAMVKMSMLDVKEGSKGEVRKNCHKIN. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04328 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Seca10g04328 313 Pfam Peroxidase 41 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PANTHER PEROXIDASE 25-RELATED 10 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Seca10g04328 313 FunFam Peroxidase 160 292 - -
Seca10g04328 313 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 Gene3D - 28 313 - -
Seca10g04328 313 SUPERFAMILY Heme-dependent peroxidases 24 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca10g04328 313 CDD secretory_peroxidase 24 312 IPR033905 GO:0004601|GO:0042744
Seca10g04328 313 Gene3D Peroxidase, domain 2 160 292 - -
Seca10g04328 313 FunFam Peroxidase 28 163 - -
Seca10g04328 313 ProSiteProfiles Plant heme peroxidase family profile. 24 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04328 Seca-Chr10 97952516 97955123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04328 2 313 Peroxidase AT4G33420 72.436 5.31e-170 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04328 K00430 - gmx:100809245 561.992