Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04309 ATGAATGCTTTGGTCCGAGTCTCTGCTGTTCTCACAAATGCTCCTTTCATGCTGAACTTGGATTGTGATCACTATGTCAATAACAGCAAGGCAGCCCGAGAAGCCATGTGCTTTTTGATGGATCCTCAAACTGGGAAGAAGGTCTGCTATGTCCAGTTTCCTCAGAGAGTTGATGGTATTGATACGCATGATCATTATGCCAACAGGAACACAGTTTTCTTTGATATTAACATAAAGGGTCTAGATGGTATTCAGGGTCCTGTATATGTGGGGACAAGATGTGTTTTTAGGAGGCAAGATTTGTATGGTTATAATCCTCCTAAGGGTCCCAAACGTCCAAAAATGGTAAGCTGTGATTGCTGCCCTTGTGTTGGAAGCCGCAGGAAGAATAAGCATGCAAAGAGTGATGCATATGTAACTTGTATCCAAATTGATTTCCTTTTACCTACTGTAATTTACCTTTTGTCAATTGACTCAATAGGGATGGATGATGACAAAGAGCTGCTAATGTCCCAAATGAATTTTGAGAAGAAATTTGGGCAGTCATCTGTTTTTGTGACTTCTACCTTGATGGAAGAGGGTGGTGTACCTCCTTGCTCAAGTCCAGAAGCCCTGCTTAAAGAAGCCATTCATGTAATTAGCTGTGGATATGAAGATAAAACTGAATGGGGACTTGAGGTATATATAACAACAACAACAACTGCCTTATGA 711 0.4093 MNALVRVSAVLTNAPFMLNLDCDHYVNNSKAAREAMCFLMDPQTGKKVCYVQFPQRVDGIDTHDHYANRNTVFFDINIKGLDGIQGPVYVGTRCVFRRQDLYGYNPPKGPKRPKMVSCDCCPCVGSRRKNKHAKSDAYVTCIQIDFLLPTVIYLLSIDSIGMDDDKELLMSQMNFEKKFGQSSVFVTSTLMEEGGVPPCSSPEALLKEAIHVISCGYEDKTEWGLEVYITTTTTAL. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04309 236 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 227 - -
Seca10g04309 236 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 104 IPR029044 -
Seca10g04309 236 Pfam Cellulose synthase 1 227 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04309 Seca-Chr10 97615822 97616821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04309 1 227 Cell Wall Biosynthesis AT5G17420 75.439 3.55e-117 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04309 K10999 - gmx:100815436 382.104