Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04257 AACAAATACCATTTCCAAACGCCAAAATCCCTCCACAATAATGCAACGCAACTAACCAGAAAGCGCCAGCATCAGCACCAGCAGCACCCGAAATCGAAAAAACCGTTTCCTTCCCCATTCAGTTCCTTTCCATTTCCGCTTCCTTCTTCTCCATGTTTTCCGCGGAATCCAATTTCCCAATCTGAGCGAAGACCGAAACTCGCACTCACCGCTACTACGACGACGACGAAGAAGAACATGGCCAAGATGAAATGGGGTGCGTTTGGATTCTGGTTTTACCTTCTCTCCATCGTGATCTGCGCTAGGGTTTGCGCTCCGGCCAGATCCGACAAGGAAACCCGAGAGCGGTTCTATGGGAACATGCTCAACTCTTCTTCACCCGAATCCAACGATGGCACCTTGGCCAAGATGTTCGATCGCGTTCTCGAAAAGGAGTTCTCAGAGAATGACCAACCTGAAGTTCCTGATAAAAGCAGCTTCAATAGCAGTGTAGCTGATCAGCAGGTAGGTCTGATACTCTGGTTTTCAATAGTAGTGTTGAAGTGGACTCTCTTTCAGCTGAAAACAAGATGGTGTTTCATTGTTGCTCCCTTACTACTCTTGCTACTGCTCTGCTTGTCTGCTCTTCTTCCTGCTGTCTCTCCTTCACCTTGGTTCGATCTTCCGGCTGTATTGGAGACTGTAGCTAAAATTACTCATGAGAAAGCAAAGAGAAATGATACACATGAGGGAAATGGCACAAGACCATTTCAGTTTCAAGATGTGTTCTCCCTAGAAAATGAAGATTCTGATGATGTGACAACTTTGATTGACAAAAAGGACAATGTCTTTGTGATGTCAAACAAGAAATCCAAATATCCTGTGCTTCAAGTGGATTTGAGGCTAATATCAGACTTGGTGGTCGTCATAGTTTCTGCAGCCATTGGTGGAATTGTCTTTTCCTGTTTGGGGCAACCGGTTATCGTGGGCTATCTCCTTGCAGGCTCACTTATTGGACCAGGGGGTTTGAAATTCATTAGTGAAATGGTACAGGTTGAGACTGTTGCACAGTTTGGGGTGGTGTTTCTTCTCTTTGCTTTGGGGCTGGAGTTTTCCTTGGCAAAGTTAAAAGCTGTGGGGCCTGTTGCTGTTCTTGGAGGGCTGCTTCAAATTGTAATATTCATGTTCCTTTGTGGCATTCTTTCCATGTTATTTGGTGCCAAATTGTCTGAGGGTGTTTTTGTTGGTTCCTTTCTTTCAATGTCATCAACAGCAGTGGTGGTAAAGTTTTTGGTGGAGCGGAATAGTAATAGTGCTCTTCACGTTCAAGTCACAATTGGGACTCTTATTTTTCAGGATTGTGCAGTGGGTTTACTATTTGCTTTGCTCCCAGTTTTGGGTGGTAACAGTGGTCTTTTACAAGGAATAATTTCAATGGGAAAACTGTTGCTAGTGTTGTCCTTGTATCTCACTGCTACTTCTATATTGTCTTGGTCATTTGTTCCTCGCTTTCTTAAACTGATGATGCGACTCTCTTCTCAGACAAATGAACTTTATCAGCTAGCTTCCGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTTGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCTACAACAGACTTTGGTCAACATACTTTGGACCAGGTAGAACCAATTCGTAACCTATTTGCAGCTCTCTTCCTGTCGAGTATTGGAATGCTTATACATGTGCATTTCCTTTGGAACCATGTGGATATCTTGCTGGCATCTGTCATTTTGGTTATAGTTGTTAAAACTACTGTTGCTACTATAGTTACAAAGGCCTTTGGGTACAGCATTAAGACATCATTTATCGTTGGTATCTCACTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCTTGAGTCGCGCTTCAAATCTTCATCTTGTCGAGAGTAAGGAGACCAGCAAGTGTAAAGGATTGGACTCTGCCATTAGCTTCTTCATTTTGGAAGTTCTTCACGGGTCATCCTTGATTACTACATCTCACATGCAAAATACATCTGCTCGAGGAAGAATTGGGGGGGAAAATGTATCTTCTTCTTCTAGGGACAACGGCTCTCAGTCTGATGATGATGATTTACAGGTTACAACGCCACTTTTGTTTAAATTGATACCTGCTGTGATGAATCTGGGTGTTCTCATGCACTGGTTCCCCTCTGAAAGTAGCACACCTAATGAGGGGAAAGGTTCAATGAATGAAGCAAACAGAATGTTGTGA 2265 0.4327 NKYHFQTPKSLHNNATQLTRKRQHQHQQHPKSKKPFPSPFSSFPFPLPSSPCFPRNPISQSERRPKLALTATTTTTKKNMAKMKWGAFGFWFYLLSIVICARVCAPARSDKETRERFYGNMLNSSSPESNDGTLAKMFDRVLEKEFSENDQPEVPDKSSFNSSVADQQVGLILWFSIVVLKWTLFQLKTRWCFIVAPLLLLLLLCLSALLPAVSPSPWFDLPAVLETVAKITHEKAKRNDTHEGNGTRPFQFQDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGPVAVLGGLLQIVIFMFLCGILSMLFGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSNSALHVQVTIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIISMGKLLLVLSLYLTATSILSWSFVPRFLKLMMRLSSQTNELYQLASVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIVVKTTVATIVTKAFGYSIKTSFIVGISLAQIGEFAFVLLSRASNLHLVESKETSKCKGLDSAISFFILEVLHGSSLITTSHMQNTSARGRIGGENVSSSSRDNGSQSDDDDLQVTTPLLFKLIPAVMNLGVLMHWFPSESSTPNEGKGSMNEANRML. 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04257 754 Gene3D - 293 656 IPR038770 -
Seca10g04257 754 MobiDBLite consensus disorder prediction 1 21 - -
Seca10g04257 754 MobiDBLite consensus disorder prediction 682 707 - -
Seca10g04257 754 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 94 648 IPR045158 GO:0015386|GO:0071805|GO:1902600
Seca10g04257 754 MobiDBLite consensus disorder prediction 1 38 - -
Seca10g04257 754 Pfam Sodium/hydrogen exchanger family 300 654 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04257 Seca-Chr10 96251903 96264602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04257 220 752 Antiporters AT5G51710 74.157 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04257 K26735 - gmx:100810302 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04257 10 96251903 96264602 Seca10g04257 10 96251903 96264602 ECH