Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04245 ATGATTCCAAAAATCTCAGATTTTGGTTTGGCCAGAATTGTTGAAATAAATGTAGACAAAGGAAGTACAAATAGAGTTGTCGGGACATTAGGTTATATGTCTCCAGAATATGCAATGCTTGGGCAATTTTCTGAAAAATCAGATGTTTACAGTTTTGGAGTCATGGTTTTAGAGATTATTACTGGAAAAAAGAATGTGAGTTCTTATGAATCACGTGTTGGTGATAGCCTCCTAAGTTATGTTTGGAGACAATGGAAGGATCAAATACCATTAAGTTTATTGGATCCAAATATTAAAGGAAGTTATTCTGAAATTGAAGTCATTAGATGCATTCAAATTGGTTTATTATGCGTCCAACAAATGCCTAATGCTAGACCAACAATGGCAACAATTGTTTCATATCTTAGCAACCACTTTATTGAATTGCCAGCTCCTGAAGAACCTGCATTTTTCTTCCATGGTAAAATGGATCCAAAAGCAACTGTACAAGAATCAAGTTCTAGTCAATCTATTAATAGTTCCACACCGTTGACCATCAATGACATGTCTATAAGTGAAATTATTCCTCGATAG 573 0.3438 MIPKISDFGLARIVEINVDKGSTNRVVGTLGYMSPEYAMLGQFSEKSDVYSFGVMVLEIITGKKNVSSYESRVGDSLLSYVWRQWKDQIPLSLLDPNIKGSYSEIEVIRCIQIGLLCVQQMPNARPTMATIVSYLSNHFIELPAPEEPAFFFHGKMDPKATVQESSSSQSINSSTPLTINDMSISEIIPR. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04245 190 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 14 140 - -
Seca10g04245 190 SUPERFAMILY Protein kinase-like (PK-like) 2 173 IPR011009 -
Seca10g04245 190 Pfam Protein tyrosine and serine/threonine kinase 4 135 IPR001245 GO:0004672|GO:0006468
Seca10g04245 190 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 186 - -
Seca10g04245 190 Gene3D Transferase(Phosphotransferase) domain 1 1 142 - -
Seca10g04245 190 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04245 Seca-Chr10 95870528 95871348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04245 1 190 Receptor kinase-like Gene Family AT4G11480 49.738 1.04e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca10g04245 PK_Tyr_Ser-Thr 1.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04245 - - gmx:100806048 283.878