Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04244 ATGAGCGAAAAGTGCATATTGTTTTATGCAGGAAAAAGAAGTCGGTCGCGAACAATTACCTTGATTGTTGTGCTCACATTTGTTTCGGTGATACTATTTTTGGTTGGCTACTTTTTGCTAAAAAGAAAAGCAAGAAAGAGTTTTAGGACTATTCTCAGAGAAAATTTTGGTCATGAAAGTGCCACTTTAGAACCGCTGCAATTGGAATTAGCTATAATTGAAGATGCAACCAACAACTTTTCAGTTGAGAATTGCATTGGAAAAGGTGGATTCGGAGAAGTTTACAAGGGCAATCTTCTTGATGGACGACCAATAGCGGTAAAAAGACTCTCAAGAAGCTCTAAACAAGGTGCAACAGAGTTCAGAAATGAAGTTTTATTGATAGCCAAGCTCCAACATAGAAATCTAGTGGCATTCATTGGTTTTTGCCTTGAAGAACAAGAGAAAATACTTATTTACGAATATGTGCCAAACAAGAGTCTTGATCATTTTTTATTTGGTTTGTCACTTTTCACCTCAATCTCCTTAATAAGTGATATGTTAGCATTTATGCGTTATGTCTATACGGTTTTTCTATGA 579 0.3575 MSEKCILFYAGKRSRSRTITLIVVLTFVSVILFLVGYFLLKRKARKSFRTILRENFGHESATLEPLQLELAIIEDATNNFSVENCIGKGGFGEVYKGNLLDGRPIAVKRLSRSSKQGATEFRNEVLLIAKLQHRNLVAFIGFCLEEQEKILIYEYVPNKSLDHFLFGLSLFTSISLISDMLAFMRYVYTVFL. 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04244 192 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 167 - -
Seca10g04244 192 Pfam Protein tyrosine and serine/threonine kinase 82 165 IPR001245 GO:0004672|GO:0006468
Seca10g04244 192 ProSiteProfiles Protein kinase domain profile. 80 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04244 192 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Seca10g04244 192 SUPERFAMILY Protein kinase-like (PK-like) 57 171 IPR011009 -
Seca10g04244 192 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 41 155 - -
Seca10g04244 192 Gene3D Phosphorylase Kinase; domain 1 42 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04244 Seca-Chr10 95869538 95870305 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04244 10 168 Receptor kinase-like Gene Family AT4G23160 49.057 1.75e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca10g04244 PK_Tyr_Ser-Thr 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04244 - - gmx:100806048 244.973