Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04237 ATGAGATTCTTATTCTTAGATTTTCATTCTGATCCTATGTCCGTAACTGCAATAGTTGGAGCTATAGCTCTAATATTCTTCATAATCATAACCCATTTAAGAAGATTCATTAGCAGCAAAGGAAGACATCATGTGGTTGCTGGCACTATCTTACACCAATTGTTCAACTTCCATAGGCTGCACGATTACATGACTGATCTTGCAAGAAAGCACAAGACTTACCGGTTGCTAAGCTTTGCCATGAGTGAAGTTTACACTGCAGACCCTGTCAACGTTGAATATATCCTCAAAACAAATTTTGCAAACTATGTGAAGGGCTGGTACCACTATGGGATAATGGCAGATCTTTTGGGGGATGGAATATTTACAGTTGATGGAGAGAAGTGGCAACATCAAAGGAAAGTTACTAGCTATGAAATCGCCACAAAAACAGTGAAAGATTTTAGCCTTCAAGTGTTTAAATCCAATGCAGCAAAACTTGCAGGGGTTGTTTCAAAAGCTGCTATATCGAATAAAACACTTGATTTCCAAGAATTGTTTATGAAATCAACACTAGACTCAGTGTTTGAGATTATCCTTGGTGTAGACTTGGACACAATTTGTGGAACATATGAAGAAGGGATCAAATTCTCCAATGCCTTTGATGAAGCAAGTGCCATTATTTTGTATCGTTATGTTGATGTTTTCTGGAAGATCAAGCAGTTCCTCAACATTGGATCAGAAGCAGTACTGAGAGACTGTATTAAAGTGGTGGATGAATTTGTGTATAAACTTATCAGAAACAAGACAGAGCAAGTTCAAAAGTCACCCCTTGATTTTCCTGTGAGTATGAGAAAAGCAGACATGGTGTCAAGGTTTCTGGTATTGAAAGAGACAGATCCAAAGTACTTAAGAGACATTATCCTGAACTTCATGATTGCAGGAAGAGATACAACAGCTACTACTCTTTCCTGGTTATTTTACATGCTCTGCAAGCATCCTCGTGTCCAGGAAAAAATTGCGCACGATGTTGGAGCAATAACAAAGTTGAAGAACACTTGTAGTATTGATGAACTTGCACACAACTTAACTGAGGAGGCCATTGAAAAGATGCACTATTTACATGCAGCTTTGACTGAGACACTCAGACTCTACCCGGCTGTTCCAGTGGTGATGAACTTGAGCATTGATAGTAAACTTTGTTTGTCAGATGAAACTTTGCCAGATGGATTTATTATAAGGAGAGGTGACACTGTAGCATACCAACCATATGCCATGGGTAGGATGAAATTCATATGGGGTGATGATGCTGAGGAATTCAGGCCAGAGAGATGGCTTGATGAAAATGGAACTTTCCAACAAGAGAGTTCTTTCAAGTTCACAGCCTTTCAGGCTGGTCCAAGAATATGTCTAGGAAAGGATTTTGCATATAGACAGATGAAAATTTTTGCAGCTGTTCTTTGTCATAGCTATAAATTCAAGCTCTCTGCTCAAAGCGAATCAGTTAATTACAGGACTATGCTCACTCTACACATTGATGGAGGTCTTTATCTGCATGCTTCCCGCAGATTCGAGCTTATGTATTAG 1566 0.3908 MRFLFLDFHSDPMSVTAIVGAIALIFFIIITHLRRFISSKGRHHVVAGTILHQLFNFHRLHDYMTDLARKHKTYRLLSFAMSEVYTADPVNVEYILKTNFANYVKGWYHYGIMADLLGDGIFTVDGEKWQHQRKVTSYEIATKTVKDFSLQVFKSNAAKLAGVVSKAAISNKTLDFQELFMKSTLDSVFEIILGVDLDTICGTYEEGIKFSNAFDEASAIILYRYVDVFWKIKQFLNIGSEAVLRDCIKVVDEFVYKLIRNKTEQVQKSPLDFPVSMRKADMVSRFLVLKETDPKYLRDIILNFMIAGRDTTATTLSWLFYMLCKHPRVQEKIAHDVGAITKLKNTCSIDELAHNLTEEAIEKMHYLHAALTETLRLYPAVPVVMNLSIDSKLCLSDETLPDGFIIRRGDTVAYQPYAMGRMKFIWGDDAEEFRPERWLDENGTFQQESSFKFTAFQAGPRICLGKDFAYRQMKIFAAVLCHSYKFKLSAQSESVNYRTMLTLHIDGGLYLHASRRFELMY. 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04237 521 Pfam Cytochrome P450 53 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 SUPERFAMILY Cytochrome P450 46 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 CDD CYP86A 72 509 - -
Seca10g04237 521 Gene3D Cytochrome P450 42 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04237 521 PANTHER CYTOCHROME P450 33 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04237 Seca-Chr10 95633211 95637088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04237 15 516 Cytochrome P450 AT2G45510 49.225 2.39e-173 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04237 - - twl:119985375 680.248