Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04236 ATGAAATTCTTATATTTCCATTCTGATCCTATGTCAGCAACTGTAGCAGTTGCAGCTATAGCTTTAGTATTCATTATCATCAAAATCTATTTCACTAGATTCCTTGGCAAAAATGAAAGGCGCCATGTTGTTGCTGGCACTAGCTTCCACCAGTTACTCAACTTCAATAGGCTGCATGATTACATGACTGAACTTGCAGGAAAACACATGACTTACAGGTTGCTAAGCTTTTCTAGGAGTGAGGTTTACACTGCAGACCCTGTTAATGTTGAATATATCCTCAAAACAAACTTTGCCAACTATGGGAAGGGAAGGTACCAGTATGAAATCTTGAGGGATGTCCTGGGTGATGGGATATTCACAGTGGATGGAGAGATGTGGAAACATCAAAGAAAGATTGTAAGCTATCAATTTTCTGCTAAGTTATTGAGAGACTACAGCACCTTGGTGTTCAAATCCAATGCAGTAAAACTTGCTGCAATAGTGACTGAAGCCTCAATCTCAAATCAACCAATTGAAGTCCAAGAACTGTTTTCTAAATCAACTATGGACTCTGTATTTAACATTGTCCTTGGTGTAGAATTGGACACTATGTGCGGAACGTATGAAGAAGGCACAAGGTTCTCCAATGCTTTCCATGAAGCAAGTGCAATTACAATACTTCGCTACATTGATATTTTTTGGAAGATCAAGCGGTTTCTCAACATAGGATTAGAAGCATCACTCAAAAAATATGTCAGAGAGATAGATGAATTTGTGTATAAAATAATTAAAAGCAAGACTGAGCAAGTCCAAAAGTCAGAACATAAGCCTGCCAGAAAAGACCTCTTGTCAAGGCTTTTAGAATATGAAGAGATGGATCCAAAGTACCTAAAAGACATCATCCTGAGTTTTATCATAGCAGGAAAGGACTCAACAGCCACCACTCTCTCTTGGTTCCTTTACATGCTCTGCAAGCATCCTCATATACAGGAAAAAATTGCACAGGAAGTCAAAATGGCAACAGGATTACAAGATTTTCCAACAGCTGAAGAGCTTGCAGCTAGCATTACTGAAGAAGTTCTTGAAAAGATGCAGTATCTACATGCAGCTTTGGCTGAGACACTCAGACTCTACCCAGCAATTCCATGGGATGCCAAGATTTGTTTTTCAGATGATACCTGGCCAGATGGATTTAGTGTGAAGAAAGGCGATGTTGCAGCTTACCAACCTTATGCAATGGGGAGGTTAAAATCATTATGGGGTGATGATGCTGAGGAATTCAAACCGGAAAGATGGCTTGACAAAGATGGAAATTTCCAGCAAGAAAGCCCCTTCAAGTTTACAGCTTTTCAGGCAGGTCCAAGAGTTTGTATTGGGAAGGATTTCTCTTACAGACAAATGAAAATATTCTGTGCTGTCCTTTTAGGAAGCCACAGATTCAAGCTGGTTGACCAACACAAATCAGTACATTACAAAACTTCACTTACTCTACTTTTAGATGGGGGTCTATACCTTAATGCATACATGAGATTGGGTCATTTAAATTCGTAA 1533 0.3933 MKFLYFHSDPMSATVAVAAIALVFIIIKIYFTRFLGKNERRHVVAGTSFHQLLNFNRLHDYMTELAGKHMTYRLLSFSRSEVYTADPVNVEYILKTNFANYGKGRYQYEILRDVLGDGIFTVDGEMWKHQRKIVSYQFSAKLLRDYSTLVFKSNAVKLAAIVTEASISNQPIEVQELFSKSTMDSVFNIVLGVELDTMCGTYEEGTRFSNAFHEASAITILRYIDIFWKIKRFLNIGLEASLKKYVREIDEFVYKIIKSKTEQVQKSEHKPARKDLLSRLLEYEEMDPKYLKDIILSFIIAGKDSTATTLSWFLYMLCKHPHIQEKIAQEVKMATGLQDFPTAEELAASITEEVLEKMQYLHAALAETLRLYPAIPWDAKICFSDDTWPDGFSVKKGDVAAYQPYAMGRLKSLWGDDAEEFKPERWLDKDGNFQQESPFKFTAFQAGPRVCIGKDFSYRQMKIFCAVLLGSHRFKLVDQHKSVHYKTSLTLLLDGGLYLNAYMRLGHLNS. 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04236 510 CDD CYP86A 70 497 - -
Seca10g04236 510 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 Pfam Cytochrome P450 51 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 SUPERFAMILY Cytochrome P450 46 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 Gene3D Cytochrome P450 38 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04236 510 PANTHER CYTOCHROME P450 27 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04236 Seca-Chr10 95570632 95575649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04236 11 504 Cytochrome P450 AT2G45510 49.102 3.89e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04236 - - vvi:100265146 655.595