Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04235 ATGGCTATGGTTCTCCCAACTTCATCCCTAGCCTTTACTGTAAGGAGGCAACCACCAGAGCTAGTGATCCCAGCAAACCCCACTCCCCATGAGCTCAAGCTGCTATCTGACATTGATGACCAAAATGGTCTACGTTGTCATATTCCAGTAGTAAACTTCTATCCTTACCAACCTTCAATGGCAGGGAAAGACCCTGTTCAAGTCATTAAACAAGCACTTGCCGAAACACTTGTATTTTACTATCCATTCCCAGGAAGACTAAGGGAAGGTCTTAACGGAAAACTAATGGTGGATTGCACTGGAGAAGGTGTGATATTCATTGAGGCTGATGCAGATGTGACACTTGAGCAGTTTGGTGACAATATCACGCCCCCATTTCCTTGCTTTGATGAGCTCCTTTACAATGTTCCAGGCTCAGATGGAATTATTGACTGTCCCCTCCTGCTTATTCAGGTAAGATTTTGA 465 0.4452 MAMVLPTSSLAFTVRRQPPELVIPANPTPHELKLLSDIDDQNGLRCHIPVVNFYPYQPSMAGKDPVQVIKQALAETLVFYYPFPGRLREGLNGKLMVDCTGEGVIFIEADADVTLEQFGDNITPPFPCFDELLYNVPGSDGIIDCPLLLIQVRF. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04235 154 Gene3D - 13 154 IPR023213 -
Seca10g04235 154 PANTHER ACYL TRANSFERASE 4 12 139 - -
Seca10g04235 154 Pfam Transferase family 19 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04235 Seca-Chr10 95495352 95499845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04235 45 154 Monolignol Biosynthesis Gene Families AT5G48930 41.071 1.03e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04235 K19861 - gmx:100795237 255.373