Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04229 ATGGTTCTCCAAACCTTACCTTTAACCTTCACTGTAAGAAGGCACCCACCAGAGCTAGTAGCCCCAGCAAAGCCTACACCTCATGAGCTTAAGCTTCTATCTAACATAGATGATCAAATAGGGCTACGTTACCATATTCCAATAGTACAATTCTATCGTTATGAGGCTTCTATGGCAGGGAAAGACCCTGTTCAAGTCATTAGACAAGCACTGGCCAAAACGCTTGTGTTTTACTATCCACTTGCTGGAAGGCTTAGGGAAGGTCCTAATGGGAAATTAATGGTGGATTGTAATGAGGAAGGTGTCATGTTCATTGAGGCTGATGCAGATGTTACACTTGATCAGTTTGGTAACGATTTTCTGCCACCATTTCCTTGCTTTGATGAGCTGCTTTATAATGTTCCTGGTTCGGATGGGATGATCAATTGTCCTCTACTGCTTGTACAGGTAACACGGCTCCAGTGTGGCGGTTTCATCTTCGCTCTCCGAATGAATCACACCATAAGCGACGGAAGTGGAATTTCCCAATTCCTGAGGGCCTTAGCCGAAACAGCATGTGGGGCCCCAAACCCTTCCATTCTCCCAGTATGGCACAGAGAACTTCTCTCTCCAAGGGACCCACCAAGAATCACATGCACCCACAGCGAATACCAACAACTTCCTCCAGACACCAAAAGCATCTTCAAACCGCATCACCGTTCCTTCTTCTTCGGCCCCAAACATATCTCCACACTCCGTTCTCTTCTCCCTCACCACCTCGCAAAATCAACCTCCTTCGAAATCCTCACCGCATGTCTCTGGCGTAGCCGTACAAAAGCACTTCAATGGCAAAACCCAAACCAAGAGGTTCGCTTACTCTGCATCGTCAACGCGCGTTACGGAAGGTGTAGCTTCAACCCTCCGTTACCTCAAGGCTTTTACGGCAACGCGTTTGTGTTCCCTGCTGCAGTTTCAAATGTTGGGAAGCTATGTGGTAGGCCGTTAGAGTATGCTTTGGAATTAGTGAAAAAGGCGAAAAATGAAGCTACTGAGGAGTATGTGCATTCTGTGGTGGATCTAATGGAGATTAAGGGAAGGCCTTGTTTTACAAGGTTAGGGTCTTTTATGGTATCGGATCTCTCAAAAGCTGCTTTAAGAGATGTGGATTTTGGGTGGGGGAAGGCTGTGTATGGTGGGTTAGCTAAAGGTGGTCTTGGTGATATTCCTGGAGTGAGTTTCTATGTTCCTTTTAGGAATTCTAAAGGAGAGCAAGGGAGGGTGGTTCCTATTTGTCTTCCTGTGGATGCTATGGAGAGGTTTGAGAAAGAGTTGGATGAGACATTCAAGATGAAGATGAAGATCAGTGACAATATAATATTAATGTCCCATCTCTAA 1374 0.4578 MVLQTLPLTFTVRRHPPELVAPAKPTPHELKLLSNIDDQIGLRYHIPIVQFYRYEASMAGKDPVQVIRQALAKTLVFYYPLAGRLREGPNGKLMVDCNEEGVMFIEADADVTLDQFGNDFLPPFPCFDELLYNVPGSDGMINCPLLLVQVTRLQCGGFIFALRMNHTISDGSGISQFLRALAETACGAPNPSILPVWHRELLSPRDPPRITCTHSEYQQLPPDTKSIFKPHHRSFFFGPKHISTLRSLLPHHLAKSTSFEILTACLWRSRTKALQWQNPNQEVRLLCIVNARYGRCSFNPPLPQGFYGNAFVFPAAVSNVGKLCGRPLEYALELVKKAKNEATEEYVHSVVDLMEIKGRPCFTRLGSFMVSDLSKAALRDVDFGWGKAVYGGLAKGGLGDIPGVSFYVPFRNSKGEQGRVVPICLPVDAMERFEKELDETFKMKMKISDNIILMSHL. 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04229 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 438 - -
Seca10g04229 457 Gene3D - 217 437 IPR023213 -
Seca10g04229 457 Gene3D - 8 216 IPR023213 -
Seca10g04229 457 Pfam Transferase family 18 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04229 Seca-Chr10 95365534 95368000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04229 19 439 Monolignol Biosynthesis Gene Families AT5G48930 32.135 9.50e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04229 K19861 K13610 gmx:100795237 738.799