Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04228 ATGAAGAATGAAGAGAGAATAATTTACACTTACCAGAATGCTTTTCATGGAGTTGCAGCCAAATTGAGTGAAGAAGAAGCAGAGAAGCTGGAGAGTGAAGAAGGTGTTGTGGCCATATTCCCTGAAACAAAGTATGAGCTACACACCACAAGAAGTCCCACATTCCTTGGGCTTGAACCAGCACACAGCACTAATATCTGGTCAGAAAATCTAGCTGGCCATGATGTTATAGTGGGAGTAGTGGACACTGGGATTTGGCCAGAGAGTGAAAGCTTCAATGATGAAGGCATGAAACCAGTACCTGCTCACTGGAAAGGTGCATGTGAGATTGGAAGAAACTTCACAAAACATCACTGCAATAAAAAGATTGTGGGGGCAACAGCCATAGGTAAAATTGATGAGCAAAATGATTCTCTATCACCAAGAGATGAAGATGGTCATGGCACTCATACTGCAGCAACAGTTGCTGGCTCTCCAGTGCATGGGGCTAACCTTCTGGGTTATGCTTATGGCACAGCCAGAGGAATGGCACCAGGAGCTAGGCTTGCATCTTACAAAGTCTGTTGGATTGATGGGTGCTTCAGCTCAGATATTGTTTCAGGTATTGATAGAGCTATAGCTGATGGTGTGAATATTCTATCCATCTCTTTGGGTGGTGGAGTCTCCTCTTATTACCATGATAGTTTATCTATAGCTGCATTTGGTGCAATGGAGAAGGGTGTTTTTGTTTCATTTTCTGCTGGAAATGCTGGGCCTGACCCTGTCAGCATCTCCAATGTGTCACCTTGGGTCACCACAGTTGGAGCCAGCACAATGGATAGAGATTTTCCTGCAGATGTTAAGCTTGGGAATGGCAATAAAAAAGGGGAAGTCATGCTATCAAGTGAGAAACAATACCCTTTAGTCTACTTTAGAAGTAACTCAACCACAATTGATCCAAGATCTGTGTGTTTTGAAGAGACTTTGGATCCTCAAGTGGTTTCAGGAAAGATAGTAATTTGTGACAGAGGCAATAGTCCTAGAGTGGGAAAGGGTCTTGTGGTTAAAAGTGCAGGAGGGGTTGGAATGATTCTTACAAATACTGTTGCTAATGGAGAAGAGCTGGTTGCAGATTGTCACCTCCTTCCAGCAGTTGCAATAGGAGAGAAAGAAGGCAAGGAGCTGAAAAATTATGTCTTGACAAATAAAAATGCTACAGCAACTCTAGCTTTTCTAGGTACAAGATTGGGAATTAAACCATCTCCTATAGTAGCAGCATTTTCATCCAGAGGGCCTAATTTTCTCAGTTTTGAAATTCTAAAGCCTGATTTAGTGGCTCCTGGGGTGAACATTCTTGCTGCTTGGAGTGAGGAAAATGGACCATCAAGTTTGGCAACAGATAACAGGAGAGTGAAGTTCAATATACTCTCTGGAACCTCAATGTCATGCCCACATGTGAGTGGCATAGCAGCATTGCTTAAAGCTAGGCACCCAGAATGGAGTCCAGCTGCTATAAAATCTGCCTTGATGACAACAGCTTATGTTCATGACAACACCATGAACCCTCTTAGAGATGCCTCAACTACTGAACCTTCAAGTCCTTATGATCATGGTGCTGGACACATTGACCCTATTGGTGCTCTTGACCCAGGTTTAGTCTATGACATTGAGCCACAGGATTACTTTGAATTCCTATGCACACAGAAGATAACTCCAACCCAACTGAGAGTTTTTTCCAAGTATTCAAACAGATCATGTAGACACACTCTTGCCACTCCAGGGGACTTGAATTACCCAGCTATATCATTAGTGTTTCCAGAGAAAACATCCACTTCAGTTTTGACTGTCCACAGAACTGTTACCAATGTTGGCCTTCCTGTTTCTAAATACCATGTTATGGTATCACCATTCAAAGGGGCTTATGTCAAAGTTGAGCCAGAAATCTTGAGTTTTACCAGGAAATACCAGAAGCTATCTTACAATATTAGCTTCACTACAAAGTCTAGGCAAACAACACCTGAATTTGGAGATCTGGCATGGAAGGATGGTATTCACAGGGTGAGAAGCCCCATTGTGATAACATGGCTGACACCAATTTGA 2079 0.4271 MKNEERIIYTYQNAFHGVAAKLSEEEAEKLESEEGVVAIFPETKYELHTTRSPTFLGLEPAHSTNIWSENLAGHDVIVGVVDTGIWPESESFNDEGMKPVPAHWKGACEIGRNFTKHHCNKKIVGATAIGKIDEQNDSLSPRDEDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARLASYKVCWIDGCFSSDIVSGIDRAIADGVNILSISLGGGVSSYYHDSLSIAAFGAMEKGVFVSFSAGNAGPDPVSISNVSPWVTTVGASTMDRDFPADVKLGNGNKKGEVMLSSEKQYPLVYFRSNSTTIDPRSVCFEETLDPQVVSGKIVICDRGNSPRVGKGLVVKSAGGVGMILTNTVANGEELVADCHLLPAVAIGEKEGKELKNYVLTNKNATATLAFLGTRLGIKPSPIVAAFSSRGPNFLSFEILKPDLVAPGVNILAAWSEENGPSSLATDNRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTMNPLRDASTTEPSSPYDHGAGHIDPIGALDPGLVYDIEPQDYFEFLCTQKITPTQLRVFSKYSNRSCRHTLATPGDLNYPAISLVFPEKTSTSVLTVHRTVTNVGLPVSKYHVMVSPFKGAYVKVEPEILSFTRKYQKLSYNISFTTKSRQTTPEFGDLAWKDGIHRVRSPIVITWLTPI. 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04228 692 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 48 IPR037045 -
Seca10g04228 692 Pfam PA domain 298 388 IPR003137 -
Seca10g04228 692 CDD Peptidases_S8_3 45 507 IPR034197 -
Seca10g04228 692 FunFam Subtilisin-like protease SBT1.5 75 284 - -
Seca10g04228 692 ProSitePatterns Serine proteases, subtilase family, serine active site. 471 481 IPR023828 -
Seca10g04228 692 ProSiteProfiles Serine proteases, subtilase domain profile. 44 541 - -
Seca10g04228 692 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 685 IPR045051 -
Seca10g04228 692 SUPERFAMILY Subtilisin-like 47 545 IPR036852 GO:0004252|GO:0006508
Seca10g04228 692 Gene3D - 558 689 - -
Seca10g04228 692 ProSiteProfiles KRAB-related domain profile. 10 75 IPR003655 GO:0006355
Seca10g04228 692 CDD PA_subtilisin_like 279 402 - -
Seca10g04228 692 MobiDBLite consensus disorder prediction 134 154 - -
Seca10g04228 692 PRINTS Subtilisin serine protease family (S8) signature 73 92 IPR015500 -
Seca10g04228 692 PRINTS Subtilisin serine protease family (S8) signature 143 156 IPR015500 -
Seca10g04228 692 PRINTS Subtilisin serine protease family (S8) signature 470 486 IPR015500 -
Seca10g04228 692 Pfam Peptidase inhibitor I9 3 48 IPR010259 -
Seca10g04228 692 FunFam subtilisin-like protease SBT1.5 273 409 - -
Seca10g04228 692 Pfam Subtilase family 73 512 IPR000209 GO:0006508|GO:0008236
Seca10g04228 692 Pfam Fibronectin type-III domain 588 686 IPR041469 -
Seca10g04228 692 Gene3D Peptidase S8/S53 domain 75 554 IPR036852 GO:0004252|GO:0006508
Seca10g04228 692 Gene3D - 273 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04228 Seca-Chr10 95349946 95352069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04228 3 692 Subtilisin-like Serine Gene Family AT5G51750 68.555 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04228 - - gmx:102661592 1132.47