Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04215 ATGTACACTTTGAAGGAGTTGCTTCGTGCAACAAACAACTTTCATCAAGATAATAAGATTGGAGAGGGAGGATTTGGAAGTGTTTATTTTGGTAGAACAAATCAAGGCGCTCAGATTGCAGTAAAGCGCTTGAAGACTATGACAGCAAAGGCAGAGATGGAATTTGCAATTGAAGTTGAAGTACTTGGAAGAGTGAGGCATAAAAATTTGTTGGGATTGAGAGGATTCTATGCAGGGGAAAATGAAAGGTTAATTGTCTATGATTACATGCCTAACCATAGCTTGCTTACTCATTTACATGGTCCACTCTCTAAGGAATGTCACTTAGATTGGTCTAGAAGAATGAGTATAGCAATTGGAGCAGCTGAAGCTCTAGCGTAA 381 0.3911 MYTLKELLRATNNFHQDNKIGEGGFGSVYFGRTNQGAQIAVKRLKTMTAKAEMEFAIEVEVLGRVRHKNLLGLRGFYAGENERLIVYDYMPNHSLLTHLHGPLSKECHLDWSRRMSIAIGAAEALA. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04215 126 SUPERFAMILY Protein kinase-like (PK-like) 4 126 IPR011009 -
Seca10g04215 126 Gene3D Transferase(Phosphotransferase) domain 1 1 126 - -
Seca10g04215 126 PANTHER OS01G0253100 PROTEIN 2 126 - -
Seca10g04215 126 ProSiteProfiles Protein kinase domain profile. 14 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g04215 126 ProSitePatterns Protein kinases ATP-binding region signature. 20 42 IPR017441 GO:0005524
Seca10g04215 126 FunFam PTI1-like tyrosine-protein kinase At3g15890 1 89 - -
Seca10g04215 126 Pfam Protein kinase domain 14 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04215 Seca-Chr10 94994249 94994734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04215 2 126 Receptor kinase-like Gene Family AT1G60800 48.413 1.72e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Seca10g04215 Pkinase 6.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04215 - - lja:Lj0g3v0095039.1 242.276