Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04197 ATGTCCAATCAAACTTCCTCACCACCTCAAATCACTGATCCCTACCAGCACCTCCAAATCGTCCTCAACCCCGACGGCACCCTCACTCGCTTGTTTGACGATCCACGCACCTTACCCTCATCAGACACCACTCTTCCAACCCCTGTCCTCACAAAAGATGTCACCATCAACCAATCCAACAACACCTGGCTTCGACTATTCCTTCCCCGAAACGCAATACCCAATCATGGTTCTGCTCACAATCTACCTCTCATTGTTTTCTTCCACGGAAGTGGCTTCATCATTCAGAGTGCTGCTTCCACCATGTACCATAACTTCTGTGTTGAAATGGCAGATACTCTCAAAGCCATCGTTGCGTCCGTTGAATACCGCCTCGCGCCGGAGCACCGGTTGCCGGCGCCATACAATGATGCGATGGAAGCGTTGTTTTGGATCAGAAGCAGCGAAGATGAGTGGCTAGCACAATATGCTGATTATTCTAATTGCTATATCATGGGGAATAGTGCTGGGGCCACTATTGCTTATAATGCAGGTCTTCGTGCTGTGGAAAACGTGGATCATCTTGAGCCGTTGAAGATCCAAGGGTTGATATTGCGCCAACCGTTTTTTGGTGGGACCAAGAGGAGTGGATCAGAGTTAAGGCTTGAGAATGACGAAGCGCTCCCCTTGTGTGTTACTGATTTGATGTGGGAGTTAGCACTGCCTATTGGGGTTGACCGTGATCATGAGTATTGCAATCTAACGGCTGGGGATGATGGTCTTGAGAAGTTGGGGAAGATTAAGGAGATTGGGTGGAGGGTGTTGGTTAGTGGGAACGGTGGGGACCCACTGGTGGACCGTGAGAAGGAGCTTGTGGAATTGATGGAGGAGAAGGGCGTGCAAGTGGTGAAGGAATTTCAAGAAGAGGGTTACCATGGGATAGAGTATTTTGAACCCTCAAAAGCTAAGGAACTCATTGGGTTAGTGAAAGGTTTCATTTCCTGA 984 0.4888 MSNQTSSPPQITDPYQHLQIVLNPDGTLTRLFDDPRTLPSSDTTLPTPVLTKDVTINQSNNTWLRLFLPRNAIPNHGSAHNLPLIVFFHGSGFIIQSAASTMYHNFCVEMADTLKAIVASVEYRLAPEHRLPAPYNDAMEALFWIRSSEDEWLAQYADYSNCYIMGNSAGATIAYNAGLRAVENVDHLEPLKIQGLILRQPFFGGTKRSGSELRLENDEALPLCVTDLMWELALPIGVDRDHEYCNLTAGDDGLEKLGKIKEIGWRVLVSGNGGDPLVDREKELVELMEEKGVQVVKEFQEEGYHGIEYFEPSKAKELIGLVKGFIS. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04197 327 Pfam alpha/beta hydrolase fold 85 306 IPR013094 GO:0016787
Seca10g04197 327 SUPERFAMILY alpha/beta-Hydrolases 24 326 IPR029058 -
Seca10g04197 327 PANTHER ARYLACETAMIDE DEACETYLASE 29 307 - -
Seca10g04197 327 Gene3D alpha/beta hydrolase 15 327 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04197 Seca-Chr10 94397998 94398981 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04197 15 295 Carbohydrate Esterase AT5G16080 33.898 4.54e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04197 - - gmx:100795069 450.284