Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04189 ATGCCCCTCACTTCTTCATCAAACTCTAAATTCTTTTGTGGAACCTTAATTGCATTTGCATTCTCCTTAAGCTTCCTATTCATGTTAAACTTAAGCTCAACCACACTCCAAACACCATCTCCCAATCCTTGCGAGGATCCGTACAAGCAACTCAACCTCACCCTTAACCCAGATGGCACAGTCACGCGCCCAGACAAACCCCCAGAGAGCCCTCCCTCACTGGATCCCAGCCTCCTCGTACTCTCCAAAGACCTCATCATCAACCAATCAAAAGGCACATGGGCCAGGATCTACCTGCCCCGCAAGGCACTGGATCACAGCTCCATGTTTCCCCTGGTGGTTTTCTTCCATGGTGGCGGGTTCATCTTCCTCAGTGCAGCCTCAACCATCTTCCATGATTTCTGCTTCAACATGGCAAACGACGTCGCAGCGGTAGTTGTCTCCATAGAGTACCGTCTTGCACCAGAACATAGACTCCCTGCGGCGTATGAAGATGCTCTGGAGGCGCTGCACTGGATCAAAACCAACCAAGGAGATGATTGGTTGAGATTCTATGTGGATTATTCCAATGTTTTTCTAATGGGGAGTAGTGCAGGAGGAAACATAGCCTACAACGCGGGTCTACGTGTAGCAGCGGGAGATGATCAACTTTCCAAGATTAGAGGGCTGATATTGGTTCAGCCATATTTTGGTGGGACCAGTAGGACTGATTCGGAACTGAGGTTGGTAAATGATCCTCATCTGTCACAATGTACCAATGACATGATGTGGGAATTGTCGTTACCCGTAGTAGACCGTGATCATGAGTATTGCAATCCGATGGTGGGAGACGGTCCTGTGAGAATGGACAAGATCAGACGGCATGGATGGTGGGTATTGGTGACCGGCTGTGGTGGTGACCCACTTGTAGATCGTCAAGTGGAGCTGGTGAGGCTGATGAAGATGAAGGGTGTGAGAGTTGTGGGACATTTCAGAGCAGGAGATTATCATGGGGCTCAAGATAGTGAACCCTTGAAAGCAAAACAACTACATGGGGTGATCAGAAGTTTTATTTCATCTTTGCCAAGCACATAG 1074 0.486 MPLTSSSNSKFFCGTLIAFAFSLSFLFMLNLSSTTLQTPSPNPCEDPYKQLNLTLNPDGTVTRPDKPPESPPSLDPSLLVLSKDLIINQSKGTWARIYLPRKALDHSSMFPLVVFFHGGGFIFLSAASTIFHDFCFNMANDVAAVVVSIEYRLAPEHRLPAAYEDALEALHWIKTNQGDDWLRFYVDYSNVFLMGSSAGGNIAYNAGLRVAAGDDQLSKIRGLILVQPYFGGTSRTDSELRLVNDPHLSQCTNDMMWELSLPVVDRDHEYCNPMVGDGPVRMDKIRRHGWWVLVTGCGGDPLVDRQVELVRLMKMKGVRVVGHFRAGDYHGAQDSEPLKAKQLHGVIRSFISSLPST. 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04189 357 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 113 129 IPR002168 GO:0016787
Seca10g04189 357 PANTHER ARYLACETAMIDE DEACETYLASE 55 330 - -
Seca10g04189 357 Pfam alpha/beta hydrolase fold 113 332 IPR013094 GO:0016787
Seca10g04189 357 Gene3D alpha/beta hydrolase 48 354 IPR029058 -
Seca10g04189 357 SUPERFAMILY alpha/beta-Hydrolases 69 352 IPR029058 -
Seca10g04189 357 MobiDBLite consensus disorder prediction 55 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04189 Seca-Chr10 94139321 94140394 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04189 58 331 Carbohydrate Esterase AT5G16080 37.413 5.95e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04189 - - gmx:100792597 487.648