Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04179 ATGTCTAATCAAATCACCGATCCCTACCAGCACCTCAAAATCGTCCTCAACCCAGACGGCACCCTCACTCGCTTACAAGATATTCCAAGCACCTTACCTTCATCAGACACCACTACTCTTCCAACCCCTGTTCTCACCAAAGATGTCACCATCAACCAATCCAACAACACTTGGGCTCGATTATTCCTACCTCAAAATCAAATTTCCGCTTCCAACCACAAATTACCCCTCATTGTTTTCTTCCATGGAAGTGGCTTCATTGTAGCGAGTGCTGCATCGACCATGTTCCATGATTTCTGTGTGAGTATGGCAGATACGGTTGGAGCTGTCATTGCGTCGGTTGAATACCGCCTTGCGCCTGAGCACCGCTTGCCGGCAGCTTATGATGATGGCATGGAAACGTTGTTTTGGCTGAGAAGGAATCAAGATGTGTGGCTGACACGATATGCTGACTTTTCCAAATGTTACTTGATGGGGAATAGTGCTGGCGCTACCATTGCCTACCATACAGGTGTTTACGTGCAGCAGAAGAGGTGA 537 0.4767 MSNQITDPYQHLKIVLNPDGTLTRLQDIPSTLPSSDTTTLPTPVLTKDVTINQSNNTWARLFLPQNQISASNHKLPLIVFFHGSGFIVASAASTMFHDFCVSMADTVGAVIASVEYRLAPEHRLPAAYDDGMETLFWLRRNQDVWLTRYADFSKCYLMGNSAGATIAYHTGVYVQQKR. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04179 178 Pfam alpha/beta hydrolase fold 78 177 IPR013094 GO:0016787
Seca10g04179 178 SUPERFAMILY alpha/beta-Hydrolases 17 173 IPR029058 -
Seca10g04179 178 PANTHER ARYLACETAMIDE DEACETYLASE 15 171 - -
Seca10g04179 178 Gene3D alpha/beta hydrolase 9 178 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04179 Seca-Chr10 93811878 93816212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04179 5 167 Carbohydrate Esterase AT1G68620 40.606 1.38e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04179 - - gmx:100795069 231.491