Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04150 ATGGCTCTGTCACCGGCATCGTCATCCTCTTACTTTTCCTATGCATTCACTTACGATGTATTCCTCAGTTTCCGAGGCGAAGATACCCGGCACGGTTTCACAGGCAATCTCTACAAAGCCCTTTGTGAAAGGGGAATCCACACCTTCTTTGATGATAAAGAGCTTCAGAAAGGGGATGAAATCGCACCATCACTTGACAAGGCCATTGAAGAGTCTAGGATTGCCATTCCCGTGTTCTCTAAGAACTATGCTTCTTCTTCATTTTGCTTAAACGAACTTGTCAGCATCATTGAGCACATCAAAGCAAAGGGGCGATTGGTTTTGCCAGTTTTCTATGACGTGGATCCTTCTCATGTGAGATATCAGAGAGAGTCTTATGGTGAAGCAATGGCCAGGCATGAGGAAAAGTTCAAGGACAACATGGAGAGGGTGCTGAATTGGAGGAAGGCTCTGCATCAAGCGGCTAACTTGTCCGGTTGGCATTTCAAACATGGGGATGGATATGAACACGAATTTATCGGGAAGATCGTTAAAGAGATCTCAAGAAAGATTGCACGTGTTGTGCTACATGTTGCTGATTACCCAGTTGGACTAGAGTCCCAAGTTCTAAATATAAATTCACTTTTGGATGTTGGGTCTAATGATGGAGTTCACATGGTAGGGATCCATGGAATTGGTGGAATAGGTAAAACAACGCTTGCTCTAGCAGTTTATAATTTGATTGCCGACCACTTTGAAGGTTTATGTTTTCTTGAAAATGTTAGAGAAAATTCAGAGAAATATGGGTTACTACATCTCCAAAAGTTTGTTCTCTCTGATATACTTGGAGAGAAACATATTGAGTTAACAAGTGTCAAACAAGGAATTTCAATAATACAACAAAGACTCCAAAGAAAGAAGGTTCTTTTGATTCTTGATGATGTTGACAAGCCGGAACAATTACAGGCTATTGCTGGAAGACCTAATTGGTTTGGCCCGGGAAGTAGAGTCATCATCACAACTCGGGATAAACACTTGCTAGCCTGTCACGAGGTTAAAAGAACATATGAGGTGGAAGAATTGAACAAGGAAGATTCTTTAGAATTGCTCAGATGGAAAGCTTTTAAAGCTGAAAAAGTTAATCCAAGTTATATGGACATCTTAAACCGTGCAGTAACTTATGCTTCTGGTCTTCCATTGGCTTTGGAAGTAATGGGTTCCAATCTATTTAGAAAAACTACAGAAGAATGGGAATCTGCTTTAAATCGATATGAAAGAATTCCTAATAACAATGTCCTAAAGATACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGAAGAGAAAAGTGTTTTTCTTGACATTGCGTGTTGCTTTAAAGGATATGAATTGGCAGAGGTCGAAGACATACTTTGTGCTCATCATGGTCACTCTATTAAATTTCATATTGGAGTTTTGGTTGAAAAATCTCTTATAAAGATTAGTTTGGGGCATGTGACACTACATGACTTGATAGAGGACATGGGTAAAGAAATTGTCCGACAAGAATCACCTAAAGAGCCTGGAAAACGTAGTAGGTTATGGTTCCATAAAGATATAGTTCAAGTTTTAAAAGAAAATACGGGAACAAATAACATTGAAATCATCTATATGAATTTCCCGTTATCTGAAGAAGACGTAGTAGTGCAATGGAATGGGGATGCCTTCAGGAAGATGGAAAACCTCAAAACACTAATTATTCGAAATGGCCAGTTTTCCAAAGGTCCCAAACATCTTCCAGACAATTTAAGAGTATTGGAGTGGTGGAGATATCCCTCATGGCATTTACCATATGATTTTCATCCAGAGAATCTTGTTATATTCAAGCTACCCTATGGTTTCTTTACATCATTTGAGTGGGCTGGCTTAGTGAAGAAGGCAAGTGAGTTGGTGAATATGAGAGATTTAAGCTTTTATGGGTGTGAATGTTTAACAAAGATACCTGATGTATCTGGTCTCCCAAATTTGGAAAAATTATCATTTAGGCACTGTAAGAATTTAATTACGATCCACAATTCAGTTGGATTGCTGGATAAACTTAAAATTTTGGATGCATTTGGTTGCAGCAAGCTTAAGAATTTTCCACCCCTCCAATTGGCCTCTCTTGAAGAACTGAAACTTACAGGTTGTGAAAGACTTGAAAGTTTTCCTGAAATATTAGTAAAGATGGAAAATATAGCAACGCTTTACTTGGATAGAACGAGCATCAAAGAATTGCCATTTTCATTTCGAAATCTTAATCAGCTTCGAAGGTTATATTTGGATTGCTATGAAAGTGTTCAGCTACCAAGTAGCATTGCCATGATGCCAGAACTTGCTCATATTACTGTCCAAACAGGTAGGGTGCTACTGGCAAATAAGGAGGACGGTGAAGAAAAAGTGAGCTCAATGCTGTCTTCAAACATTAAACGTCTTGACCTCATATACTGTGAGTTGTCAGATGAATTTTGGACAATAGGTCTCCAGTGGTTTGCTAACGTGAAACAATTAGACCTATCAAACAGTAATTTCACAATTGTTCCTGAATGCATCAAAGAGTGTTGCTTTTTATGGAATCTTAAATTGGATGATTGCTATCAACTTCGAGAAATCAGAGGGATTCCGCCATGTTTAAAATATTTATCGGCATGCAATTGTGTATCCTTAAGTTTCTCGTGTAGAAGCATGTTACTGAATCAGGAACTGCATGAGGCTGGAAATACCAAGTTATTTTGTTTTCCAGGAAGTGCAAGGATTCCGGAGTGGTTTGAGCACCAGAGTAGGGAATCAACTTCTTTTTGGTTTCGTAACAAGTTCCCTCATGTAGCTCTCTGTATTCTTGCACCAGTACATGATACACGAGTAGAAGTGATGATCAATGGCAAGGGATTTTTATGTACATATGACGAGGATGACTTTGGTAAAGGATTTTTTTTAATACTGCAGCGGAGTAATACACATCTTCTTCATATGCAAAGGGAAAATTTATGGATTAAGAAAAGTTACAGCGACAAGGATGAATTTAATCTGGATGAAGCACTTTCAGCAAAGGAGTGGAACCATGTGGAGGTTAAGGCAGTCGTTGGGTCAAATGACATAGATTATGGAATCCATGTTTTGAAAGGGAAAACTAGCATGGAGGACATTCGATTCACCAATCCTTATAAAAAGAGAAAATTATACTTGCATTTGCCACCTCTTCCAGTTCCAGAGAATGGTGTCAATTCTGAGCTCTCAAGCACTGATTCTGATGTCGATGATAAAGAATGGGATGAGTCTTCCAATTCTGAGACTCCATCATACAATGGGATTAGTGTTCTCACTGGTGTTGGAACTGAAAGGGAGTTGGATAATGATGGAAGGAAGACTACGATGAACATGATCGAGTTGGATAATGAAGGGTAA 3399 0.3878 MALSPASSSSYFSYAFTYDVFLSFRGEDTRHGFTGNLYKALCERGIHTFFDDKELQKGDEIAPSLDKAIEESRIAIPVFSKNYASSSFCLNELVSIIEHIKAKGRLVLPVFYDVDPSHVRYQRESYGEAMARHEEKFKDNMERVLNWRKALHQAANLSGWHFKHGDGYEHEFIGKIVKEISRKIARVVLHVADYPVGLESQVLNINSLLDVGSNDGVHMVGIHGIGGIGKTTLALAVYNLIADHFEGLCFLENVRENSEKYGLLHLQKFVLSDILGEKHIELTSVKQGISIIQQRLQRKKVLLILDDVDKPEQLQAIAGRPNWFGPGSRVIITTRDKHLLACHEVKRTYEVEELNKEDSLELLRWKAFKAEKVNPSYMDILNRAVTYASGLPLALEVMGSNLFRKTTEEWESALNRYERIPNNNVLKILKVSFDALEEEEKSVFLDIACCFKGYELAEVEDILCAHHGHSIKFHIGVLVEKSLIKISLGHVTLHDLIEDMGKEIVRQESPKEPGKRSRLWFHKDIVQVLKENTGTNNIEIIYMNFPLSEEDVVVQWNGDAFRKMENLKTLIIRNGQFSKGPKHLPDNLRVLEWWRYPSWHLPYDFHPENLVIFKLPYGFFTSFEWAGLVKKASELVNMRDLSFYGCECLTKIPDVSGLPNLEKLSFRHCKNLITIHNSVGLLDKLKILDAFGCSKLKNFPPLQLASLEELKLTGCERLESFPEILVKMENIATLYLDRTSIKELPFSFRNLNQLRRLYLDCYESVQLPSSIAMMPELAHITVQTGRVLLANKEDGEEKVSSMLSSNIKRLDLIYCELSDEFWTIGLQWFANVKQLDLSNSNFTIVPECIKECCFLWNLKLDDCYQLREIRGIPPCLKYLSACNCVSLSFSCRSMLLNQELHEAGNTKLFCFPGSARIPEWFEHQSRESTSFWFRNKFPHVALCILAPVHDTRVEVMINGKGFLCTYDEDDFGKGFFLILQRSNTHLLHMQRENLWIKKSYSDKDEFNLDEALSAKEWNHVEVKAVVGSNDIDYGIHVLKGKTSMEDIRFTNPYKKRKLYLHLPPLPVPENGVNSELSSTDSDVDDKEWDESSNSETPSYNGISVLTGVGTERELDNDGRKTTMNMIELDNEG. 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04150 1132 SMART AAA_5 216 350 IPR003593 GO:0016887
Seca10g04150 1132 Gene3D - 353 437 IPR042197 -
Seca10g04150 1132 Gene3D - 15 184 IPR035897 -
Seca10g04150 1132 SMART till_3 17 157 IPR000157 GO:0007165
Seca10g04150 1132 SUPERFAMILY L domain-like 551 922 - -
Seca10g04150 1132 PRINTS Disease resistance protein signature 295 309 - -
Seca10g04150 1132 PRINTS Disease resistance protein signature 388 402 - -
Seca10g04150 1132 PRINTS Disease resistance protein signature 219 234 - -
Seca10g04150 1132 PRINTS Disease resistance protein signature 702 718 - -
Seca10g04150 1132 MobiDBLite consensus disorder prediction 1112 1126 - -
Seca10g04150 1132 Gene3D Ribonuclease Inhibitor 553 726 IPR032675 -
Seca10g04150 1132 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 770 IPR044974 GO:0006952
Seca10g04150 1132 Pfam TIR domain 18 183 IPR000157 GO:0007165
Seca10g04150 1132 SUPERFAMILY "Winged helix" DNA-binding domain 424 530 IPR036390 -
Seca10g04150 1132 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 186 - -
Seca10g04150 1132 Coils Coil 1123 1132 - -
Seca10g04150 1132 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Seca10g04150 1132 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 160 IPR035897 -
Seca10g04150 1132 MobiDBLite consensus disorder prediction 1069 1132 - -
Seca10g04150 1132 Pfam NB-ARC domain 206 422 IPR002182 GO:0043531
Seca10g04150 1132 Gene3D - 185 348 IPR027417 -
Seca10g04150 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 447 IPR027417 -
Seca10g04150 1132 Gene3D Ribonuclease Inhibitor 727 930 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04150 Seca-Chr10 92584993 92590339 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04150 12 812 WRKY Transcription Factor Family AT4G12020 31.758 6.66e-88 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04150 - - gmx:100780257 1243.8