Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04146 ATGTCTCAGAAATTTGTCTATTTTAAGGAAGGCTTTAAAAGGAACAAAGACCAAGAAGGAAAAATGACTCACAAAGATATTAGAACTGGATGTTTAGCACACATTGGTCGAGAATCAGGTGGAAAATATGTTGTTACATCTTTTTTAAAAGACCATGATCATGAGCTTGCAACCCCCAAGAGTAAGCACAAATTACCATCACAAAGAAGGGTTTCTACTGCTCAAGCTGCTGAAATTGAAATGCCGAATCGCTCAGGTATCTGCCAAAAATTAATTTTTGAGTTTTTAAGTCGACAGGTTGGAGGGAGAAAGAATGTTGGTTGCACTGCTAAAGATATTAGCAATCACTTGAATTCTAAAAGGATGAAGGAAATGGAAGAAGGCAAAGCATACACTCTACTTCATTATTTTAAATCAAAATGCTAA 426 0.3568 MSQKFVYFKEGFKRNKDQEGKMTHKDIRTGCLAHIGRESGGKYVVTSFLKDHDHELATPKSKHKLPSQRRVSTAQAAEIEMPNRSGICQKLIFEFLSRQVGGRKNVGCTAKDISNHLNSKRMKEMEEGKAYTLLHYFKSKC. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04146 141 PANTHER OS01G0519700 PROTEIN 4 138 - -
Seca10g04146 141 Pfam FAR1 DNA-binding domain 2 57 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04146 Seca-Chr10 92348110 92350584 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g04146 FAR1 5.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04146 - K17604 tpra:123914859 223.402