Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04124 ATGATGTCAACTTTTCTCAATGGAAGCTCCTTATTCTGGTTCTCCCTATCAATGGTTGCATTGATTACTATGTTCCTCAATCTTCTATCCAAATGGAATTCCAACCCTTCAACCACAAAAAATTCACCCCCATCTCCTCCAAAGCTCCCAATAATAGGAAATCTCCATCAACTTGGCATGTTCACTCACCGCACACTCCAATCCTTAGCACAAACCTATGGTCCCTTGTTGTTGCTTCACTTTGGGAAAGTTCCAGTCCTTGTTGTCTCAACTGCTGATGGTGCCCGTGAGATTCTGAAAACTCATGACCTTGTTTTTTGCAACAGACCACATCGCATGATGTTTGATATCTTCTGGTATGGTTCCAAAGATGTAGCATCTGCCCCATATGGCCAATATTGGAGGCAGGTAAGGAGCATCTGTGTCTTGCATCTTCTGAGTGCCAAAAAGGTTCAATCTTTTCAAGCTGTGAGAGAAGAGGAAGCTGTCATAATGATTGAAAAGATTAGGCAGTGTTGTTCTTCTTTGATGCCAGTGAATTTAACTGATTTGGTATCTGCAACCACCAATGACATAGTGTGTAGAGCTACAATTGGTAGGAGATACAGTGGAGAAGATGGGGGTAAGCTTAGGGAGCCAGTGGCTGAGTTGGAAGTGCTATTGGGTGCTTCAGTGTTAGGGGACTATGTGCCTTGGCTTGGTTGGTTGAGCAGAGTTAATGGTCTGTATGCCAGAGCAAACAGAGTGGCTAAACTGTTTGATGAGTTTTTGGATGAAGTTGTTGAAGAGCATGTTAGTGGTTGGTTGGAGAGAGGGAAAGATGGGCTTGATGATTTTGATGGGAAAGGCCAGAATGATTTTGTGGACATTTTGCTGTGGATCCAAAGGAGAAATGCAATGGGCTTTGAGATTGATAGAACAATCATAAAGGCTTTGATTATGGATATGTTTGGTGCAGGTACAGATACTACCCTTGCAGTCCTAGAGTGGGCAATGACAGAACTCTTAAGGCACTCAAATGTTATGCACAAACTACAAGATGAGGTGAGGAATGTTGTTAGGGACAGAACTCACATAACTGAGGATGATTTAAGCAGCATGCATTACTTGAAAGCAGTGGTTAAAGAAACACTTAGATTACATCCCCCATCTCCCTTATTGATTCCAAGGGAATCCATGCAACATACCAAAGTGATGGGCTATGACATTGCAGCTGGCACACAAGTAATAGTTAATGGTTGGGCTATTGCAACAGATCCTTCCTATTGGGATCAGCCTTTAGAATTTCAACCAGAGAGATTCTTGAACAGTTCAATAGATATCAAGGGACATGATTTCCAACTTATCCCATTTGGAGCAGGAAGGAGGGGTTGTCCAGGAATAGCATTTGCCATGATTGTGAATGAGTTAGTGCTAGCAAACCTTGTCCACCAATTTGATTGGGAATTGCCTGGTGGAGTAATGGGAGATCAGTCATTGGACATGTCTGAAACCACTGGGTTGACCATTCACAGAAAATTTCCTCTTGTGGCAGTTGCTTCCTTACACAAGAAGTGA 1557 0.4271 MMSTFLNGSSLFWFSLSMVALITMFLNLLSKWNSNPSTTKNSPPSPPKLPIIGNLHQLGMFTHRTLQSLAQTYGPLLLLHFGKVPVLVVSTADGAREILKTHDLVFCNRPHRMMFDIFWYGSKDVASAPYGQYWRQVRSICVLHLLSAKKVQSFQAVREEEAVIMIEKIRQCCSSLMPVNLTDLVSATTNDIVCRATIGRRYSGEDGGKLREPVAELEVLLGASVLGDYVPWLGWLSRVNGLYARANRVAKLFDEFLDEVVEEHVSGWLERGKDGLDDFDGKGQNDFVDILLWIQRRNAMGFEIDRTIIKALIMDMFGAGTDTTLAVLEWAMTELLRHSNVMHKLQDEVRNVVRDRTHITEDDLSSMHYLKAVVKETLRLHPPSPLLIPRESMQHTKVMGYDIAAGTQVIVNGWAIATDPSYWDQPLEFQPERFLNSSIDIKGHDFQLIPFGAGRRGCPGIAFAMIVNELVLANLVHQFDWELPGGVMGDQSLDMSETTGLTIHRKFPLVAVASLHKK. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04124 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Seca10g04124 518 CDD CYP71-like 72 509 - -
Seca10g04124 518 PANTHER CYTOCHROME P450 71B11-RELATED 24 514 - -
Seca10g04124 518 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 FunFam Cytochrome P450 83B1 30 512 - -
Seca10g04124 518 SUPERFAMILY Cytochrome P450 43 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 Pfam Cytochrome P450 43 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 Gene3D Cytochrome P450 28 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g04124 518 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04124 Seca-Chr10 91634095 91637731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04124 40 514 Cytochrome P450 AT3G48270 50.630 6.20e-179 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04124 - - aprc:113866669 755.362