Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04120 ATGGGAACCTCAGTGGTGACCCTTATATCCTACACACCAATGTGTTTAGCCAAGGCAAGGGAAACAGAGAGTAGCAATTCTATCTCTGGTTTGACCCATATTATCAATTGCATTATAGATGTTGATGGGGTTGGTGTTAAGAATGAGAATGAGGAGACCCCAAATCCAAAGTTGAAAGCTTTACATTGGGATAAAGTTAAGGCCAGCTCAGATAGGGCCATGGTTTGGGATCGGTTGAGACCAAGTTCTTTCCATTAA 258 0.4225 MGTSVVTLISYTPMCLAKARETESSNSISGLTHIINCIIDVDGVGVKNENEETPNPKLKALHWDKVKASSDRAMVWDRLRPSSFH. 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04120 85 ProSiteProfiles Formin homology-2 (FH2) domain profile. 48 85 IPR015425 -
Seca10g04120 85 PANTHER FORMIN-RELATED 48 84 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Seca10g04120 85 Gene3D Formin, FH2 domain 43 85 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04120 Seca-Chr10 91443303 91444025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04120 51 84 FH2 protein (formin) Gene Family AT3G25500 85.294 7.49e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04120 - - aprc:113857957 82.8037