Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04093 ATGGGCTTTCTCCGGCGACTCTTCGGCGGCAAGAAGCACCAAAACTCCCCGCCGGGAACTTCTGACGGGTCGGGTCACAAACCCGGCAAAGAGAAGAGAAGGAGCTGGAGCTTCGCGAAACACAACACAAGGGACAAGTCCAACTCACTCTCAACCCTCAACCACCAATTTGACCCTTCCACTTCCTCTGCTCCCTTCACTGACTCCTTGGACGCCAATAAGCATGCCATCGCCGTCGCAGCCGCAACCGCCGCCGTCGCTGAGGCCGCACTCGCCGCCGCCCACGCTGCCGCAGAGGTCGTCAGACTAACCAGCAGCACCGGAGCCAGTAGTGCACCCGCCACTACAGCTCCAGTCCGGCGGCGGTTGGCGGAGGAAACCGCCGCCGCCGTGAAGATACAGTCAGCGTTCCGAGGTTACTTGGCAAGGAGGGCATTAAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTGAGGGGCCACATTGTAAGAAAGCAAACTGCAGATATGCTAAGGCGCATGCAAACATTGGTGCGACTTCAGTCCCGGGCACGTGCGAATCGTGTGCACGTGTCAGATAATATGCACTCTTTCAAGTCTTCACTTTCTCATTACCCTGTCCCTGATGATTATGAGCACCCACTTCGTGCCTATAGTACAAAATTTGATGGATCTTCTATCCTCAAGAGATGTAGTTCCAATTCAAATTTCAGGGACATTGACTTAGAGAGAGCCCGGTTTGGTTCCAATTGGTTAGACAGTTGGATGGAAGAAAATGCATGGAGCCAAACTAGAGATGCTTCATTGAAAAATGGGCACCCTGATGATGACAAGAGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCACACTTGAACTCCTCCCATCATTATTTTTCTTCTGATTACAACAATGAGAATTTTATGGCATATGAGTCTCCATCAAAACATTCTTCTTCTAGAGCTCCAAATCCTAGTCTCTCTTCAAGGGAGGTGTTATCCATAGGCTCTTTGAAATTTCACAAAGGAATAAAAGAAGAAGTAGCTTCAAGAACTGCTGAGAATAGTCCACAAGCATTTTCTGCCTCCTCTAGACTTGGAAGTGGTGCAAGGAGAGGTCCTTTTACACCCACTAAAAGTGAGTGTTCATGGGGTTTCTTCAGTGGCTACTCAGGTTATCCCAATTACATGGCCAATACTGAATCTTCTAGAGCTAAGGTTAGGTCACAAAGTGCTCCAAGGCAAAGGCTGGAGTTTGAGAGATATGGTGCCACTAGAAGGTATGTTCAGGGTCTTTGGGAAGAAGGGCCCAATTCAGATAGGGATTCTGATCTCAAGAGCAAGGCCTATTCAACCACAAGCAGATTGAGCAGAATTGGGAGTACCAATTTAAGGTGA 1401 0.4875 MGFLRRLFGGKKHQNSPPGTSDGSGHKPGKEKRRSWSFAKHNTRDKSNSLSTLNHQFDPSTSSAPFTDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSTGASSAPATTAPVRRRLAEETAAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSRARANRVHVSDNMHSFKSSLSHYPVPDDYEHPLRAYSTKFDGSSILKRCSSNSNFRDIDLERARFGSNWLDSWMEENAWSQTRDASLKNGHPDDDKSDKILEVDTWKPHLNSSHHYFSSDYNNENFMAYESPSKHSSSRAPNPSLSSREVLSIGSLKFHKGIKEEVASRTAENSPQAFSASSRLGSGARRGPFTPTKSECSWGFFSGYSGYPNYMANTESSRAKVRSQSAPRQRLEFERYGATRRYVQGLWEEGPNSDRDSDLKSKAYSTTSRLSRIGSTNLR. 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04093 466 MobiDBLite consensus disorder prediction 25 41 - -
Seca10g04093 466 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Seca10g04093 466 MobiDBLite consensus disorder prediction 42 63 - -
Seca10g04093 466 MobiDBLite consensus disorder prediction 349 376 - -
Seca10g04093 466 PANTHER IQ-DOMAIN 5-RELATED 21 441 - -
Seca10g04093 466 MobiDBLite consensus disorder prediction 352 366 - -
Seca10g04093 466 SMART iq_5 148 169 IPR000048 GO:0005515
Seca10g04093 466 SMART iq_5 125 147 IPR000048 GO:0005515
Seca10g04093 466 Pfam IQ calmodulin-binding motif 150 167 IPR000048 GO:0005515
Seca10g04093 466 Pfam IQ calmodulin-binding motif 127 147 IPR000048 GO:0005515
Seca10g04093 466 MobiDBLite consensus disorder prediction 1 63 - -
Seca10g04093 466 MobiDBLite consensus disorder prediction 431 466 - -
Seca10g04093 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 171 IPR027417 -
Seca10g04093 466 Pfam Protein of unknown function (DUF4005) 357 436 IPR025064 -
Seca10g04093 466 MobiDBLite consensus disorder prediction 450 466 - -
Seca10g04093 466 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Seca10g04093 466 Gene3D - 118 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04093 Seca-Chr10 90318002 90323376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04093 1 434 IQD Protein Family AT5G62070 45.880 4.78e-63 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04093 - - gmx:100785181 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04093 10 90318002 90323376 Seca10g04093 10 90318002 90323376 ECH