LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca10g04038	ATGTCTGCGGACAAAAGAAAGTGTGTCAGGTCCAACAGCTTGAAAAATGGTGCAGCACTTTATATTCTGAAACCCTTTTGTGGAGATGACTTCAAAGACATTTGGAAGTATGCAGCGGCTGCAAGGAAAGGGAAACTAGTGATTGAAAATGAATTGAGAAGCAGAGAAGCATCATCATCAACTGAACCTAAGAGAAAAAGAAAGCACGGCAAGGGAAAGAGTAAAAAGGAAGACCAAAGTGAAGGAAGGTCTCAGGTTGCAAAGAAACCAAAGTTGGTCTGGACAACATACCTTCAAAATCTTTTTCTGCTTGCCATAAGACAAATTGGATTGGATAGGGCTGTGCCAAAGAAAATTCTCGAGATCATGAATGTACCATACTTGACAAGAGAAAATGTTGCCAGTCACTTACAGAAGTATAGAAACTTCCTGAAAAAAGTTGCAGACAGAGGAATAATGGAGGGCTTATCTGAAAGCACTCTAAGGTCAAGGTTTGCTTCTAGTCTTCCAGCAACGGTGATCCAACACATCCAAACAAGAGCTGAGCAACTGCGTGTTCCTCTGCAGCAATATTTGAAAAGATTGTCATATCAAGCAGGAAACAGAACAATAACCTCTACTCTTAATCCTTTCAACTATTGTCCAATGAGTCTTTCTGATCAACAAGTTTCAAGCAACAACTATGTGACTACTCAACTTGGGACAAGTCAATTACCCTATCCATTGCACAATGGCCTGATGTTTCAAAACCAGCATGGTAGTTCTTTGAATCAAGTCAGACTTGGACAATCAAGCTTTGGAAGCCATAATATTGGGACTAATAATATTATTGGACAATCAAGCTATGCAAACCCACCATATCAAGCAAATAGCTCATACAGTTCTGGTGCTATCTATCCACCATATGGAGGTGGACATGGTTTGATGACATCTGCTAATGGCCTAATAGGAGGTTACCAAAACTATGGTTCACTGGGAAATCACAACTCTAGATATGATCCAGGAAACTGGAACATGGGAAATTTGAGCAGCTCTAATGTCCTGCCTCAGACTTCTACTTATTATAACTCTGGAATTCAACAGAATGATGGATCACAAATGGTAGGGACTGGGATAAAAGGAGGGATTAACAATGTTGGTACTGCAAACAACAATAGCCTTGACTTTAACAATGTTGATACTGCAAACAACAATAGCTTTGGCTTTAACAATGTTGGTAATGCAAACAATGGCTTTGGCTTCATCAATGGGACACAAAATGCAAACATGAATGTGGCATCCTTGAGGAATGGAGATTTTGGTTTGGTTGAAGGACAGTTTGCTTTTCCTTCCTCTGCTTCTAATATTGGGGATGTGTGTGCAAGTGAGCTTCCACCACCAACATTGATCACTGATGGAACACTAGAAGAAAATGTTTCAGGGCTCCCACCATTGCCTCAGCAACTAGATGACATTGTTGTAGAAAATGAGCATCAGAATAATAATGTCACTTCAATCAGTGAGAGTGAGGCCAGCCAACTGAACTATGACCTTTCTGACATTTTCTTGATGCTAGATGAAATGGATCTTCTTAATGAGGTAAGTTGGCATCGGAAAAATTTATTATAA	1608	0.3986	MSADKRKCVRSNSLKNGAALYILKPFCGDDFKDIWKYAAAARKGKLVIENELRSREASSSTEPKRKRKHGKGKSKKEDQSEGRSQVAKKPKLVWTTYLQNLFLLAIRQIGLDRAVPKKILEIMNVPYLTRENVASHLQKYRNFLKKVADRGIMEGLSESTLRSRFASSLPATVIQHIQTRAEQLRVPLQQYLKRLSYQAGNRTITSTLNPFNYCPMSLSDQQVSSNNYVTTQLGTSQLPYPLHNGLMFQNQHGSSLNQVRLGQSSFGSHNIGTNNIIGQSSYANPPYQANSSYSSGAIYPPYGGGHGLMTSANGLIGGYQNYGSLGNHNSRYDPGNWNMGNLSSSNVLPQTSTYYNSGIQQNDGSQMVGTGIKGGINNVGTANNNSLDFNNVDTANNNSFGFNNVGNANNGFGFINGTQNANMNVASLRNGDFGLVEGQFAFPSSASNIGDVCASELPPPTLITDGTLEENVSGLPPLPQQLDDIVVENEHQNNNVTSISESEASQLNYDLSDIFLMLDEMDLLNEVSWHRKNLL.	536

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Seca10g04038	535	FunFam	Two-component response regulator	85	148	-	-
Seca10g04038	535	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	89	143	IPR006447	GO:0003677
Seca10g04038	535	Gene3D	-	86	148	-	-
Seca10g04038	535	SUPERFAMILY	Homeodomain-like	87	146	IPR009057	-
Seca10g04038	535	PANTHER	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	55	419	IPR044841	GO:0003700\|GO:0006355
Seca10g04038	535	MobiDBLite	consensus disorder prediction	52	85	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca10g04038	Seca-Chr10	87490004	87492613	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca10g04038	1	165	Response Regulator Gene Family	AT5G07210	39.806	2.67e-30	123

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-G2-like	Seca10g04038		None	None	None

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca10g04038	-		K14491	aprc:113866677	456.447

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