Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04026 ATGGCGTTGAGAGTACCTGCTATTCCATTCACCTTTGTGGTTCACCTATTGGGAGTGGCTGGAATCGTGATGGTGTTGGTTTGGAACATATACTACAGGGGTGGTTTAGCTTGGGAAGCTTCCAACAAAGCCCTCATCTTCAATCTCCATCCCGTTCTTATGCTTATTGGATTAATAATTATTGGTGGCGAAGCTATTATAAGTTACAAATCTCTTCCTTTGAAGAAAGAAATCAAGAAATTGATACACCTCGTTCTTCATAAAATCGCACTAGTACTTGGAATAGTTGGAATAAGTGCTGCCTTTAAGAATCATAATGAACTTGGAATTGATAATATGTACAGCTTGCATTCATGGCTTGGAATTGGGGTCATTGCCCTATATGGAATTCAGTGGATATTTGGGTTTGTGATGTTTTTCTTCCCTGGAGGGACTTCAGCCCTAAAGGCCCAATCACTTCCTTGGCATGTCCTATTTGGGCTGTTTGTGTATGTCTTGGCTGTTGGAACTGCATCCCTTGGGTTTCTGGAGAAGCTCACTTTCATGGAGAGCTCAGGATTGCCAAAATATGGTTCTGAGGCCTTTCTTGTCAATTTCACTGCCATTGTCACAATCTTATATGGTGCATTTGTTGTATTATCTGCCATTTCTCAAGCTCCTGCAGCAACAACAGAAGATGACTATGCACCCATATAG 696 0.4152 MALRVPAIPFTFVVHLLGVAGIVMVLVWNIYYRGGLAWEASNKALIFNLHPVLMLIGLIIIGGEAIISYKSLPLKKEIKKLIHLVLHKIALVLGIVGISAAFKNHNELGIDNMYSLHSWLGIGVIALYGIQWIFGFVMFFFPGGTSALKAQSLPWHVLFGLFVYVLAVGTASLGFLEKLTFMESSGLPKYGSEAFLVNFTAIVTILYGAFVVLSAISQAPAATTEDDYAPI. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04026 231 CDD Cyt_b561_ACYB-1_like 40 183 - -
Seca10g04026 231 PANTHER CYTOCHROME B561-RELATED 1 217 IPR043205 GO:0016491
Seca10g04026 231 FunFam Cytochrome b reductase 1 4 225 - -
Seca10g04026 231 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Seca10g04026 231 Gene3D - 3 224 - -
Seca10g04026 231 SMART 561_7 49 175 IPR006593 -
Seca10g04026 231 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04026 Seca-Chr10 86993668 86998794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04026 1 218 Chloroplast and Mitochondria Gene Families AT4G25570 71.560 2.12e-113 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04026 K08360 - aew:130768155 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04026 10 86993668 86998794 Seca10g04026 10 86993668 86998794 ECH