Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04025 ATGGAGTGCAATAAGGATGAGGCCACCAGAGCTAAAGAAATTGCTGAGAAGAAGTTTGCTGCAAAAGATATTTTAGGAGCAAGGAAGTTTGCTTTGAAGGCCCAAAGTTTATTTCCTGGTCTTGAGGGTATTTCTCAAATGTTAACAACACTTAATGTGTATATTTCCGCTACTAATGAAATAAATGGTAAAGTAATCCTAGATTGGTATGGTATACTTGGTGTGGATCCCTTGGCTGATGATGACACAGTGAGGAAACAATATAGAAATCTGGTTCATATGCTTCACCCTGATAATAACAAGTCCATTGGTGCAGATTGGGCCTTTAAACTAGTTTCAGAGGCATGGAATGTACTTTCAAATAAGGCTATAAGGCTAGCATATGATAAGATGATCGAGGCAAGGACAGATGCTGAAGAGATTAGCAAGAAACCAAGTCAAAGTAAAAATGATTCTACTAACAAAACAACAGTGAAAGAGATCAGTGGAAATGACCACCACCAAAAAGCAAATGAGGAAGGAGGAAAATCTGTAAGAAACTCAGATGGAAGAATGAATGGATCTGAAGCCATGAATTTATTTGCAGGAATTGCCACAAATAATGACATGAAGAACATGTTATTAATAGATGCCCCAGATCCTCATTTCTATTGTTTTAACTTGGATCGACTTGGAGGATCTTTTGGTGAAAATCAAGTATGGGCTGCATTTGATGAGGAAGAAGGGATGCCTCGATATTATGCAATGGTACACAATGTCATTTCTATGAATCCATTCATGATGCATTTCAGCTGGCTCGACATAAAGAAGACCAAGGGTGAAAGTACCTCTCTAATCAATCGTGGTGCTTCACGCTTTTCAAGAGCTTGTGGGAATTTCAGAATAGGAATATATGATATCACTGACACATGTGTTTTCTTCTCTCACAAGGTGAGATGTAAAATTGGTAATGATGGAACTATTTTTATATATCCCAAGAAAGGGGATGTTTGGGCCCTCTATAGAAATTGGTCTTCCAACTGGAATACACTAACACCTGATGAGGTGACTCAAAAGTATGATATGGTTGAAGTACTTGATGTTTTCGATGATTTCATTGTTATTCCTCTGGTCAAAGTAGCTGGTTTCAGGACAATATTTCGCCGTGATTTGGATTTGAGAGAAATCAGGGTCATTCCAAGGAAAGAAATATTGAGGTTCTCTCATCAGGTTCCTTCAACCATACTTAGTGGTGAAGAAGCTCCTGATGCCCCAAAGGGTCACTGGGAGTTGGACCCAGCAGCTATTTCATCTGAACAATATCAGGTAACCGAAGTTGTGAAGGACAGAGACATGGTTATGGTGAACAATGAGGATACTATAATTAAAGAAACAACAAATTATAATATGAAAGAAGCTGATAGTGAGGAAATGAACAATGATATGGGAACACGTGGGGAAGGAAAGAAAAAGGTATTGAAACTATAG 1467 0.3831 MECNKDEATRAKEIAEKKFAAKDILGARKFALKAQSLFPGLEGISQMLTTLNVYISATNEINGKVILDWYGILGVDPLADDDTVRKQYRNLVHMLHPDNNKSIGADWAFKLVSEAWNVLSNKAIRLAYDKMIEARTDAEEISKKPSQSKNDSTNKTTVKEISGNDHHQKANEEGGKSVRNSDGRMNGSEAMNLFAGIATNNDMKNMLLIDAPDPHFYCFNLDRLGGSFGENQVWAAFDEEEGMPRYYAMVHNVISMNPFMMHFSWLDIKKTKGESTSLINRGASRFSRACGNFRIGIYDITDTCVFFSHKVRCKIGNDGTIFIYPKKGDVWALYRNWSSNWNTLTPDEVTQKYDMVEVLDVFDDFIVIPLVKVAGFRTIFRRDLDLREIRVIPRKEILRFSHQVPSTILSGEEAPDAPKGHWELDPAAISSEQYQVTEVVKDRDMVMVNNEDTIIKETTNYNMKEADSEEMNNDMGTRGEGKKKVLKL. 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04025 488 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Seca10g04025 488 SUPERFAMILY Chaperone J-domain 67 132 IPR036869 -
Seca10g04025 488 CDD DnaJ 68 121 IPR001623 -
Seca10g04025 488 Gene3D DnaJ domain 67 195 IPR036869 -
Seca10g04025 488 PANTHER BNAC03G44070D PROTEIN 1 429 - -
Seca10g04025 488 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Seca10g04025 488 SMART dnaj_3 67 124 IPR001623 -
Seca10g04025 488 MobiDBLite consensus disorder prediction 160 179 - -
Seca10g04025 488 MobiDBLite consensus disorder prediction 138 185 - -
Seca10g04025 488 PRINTS DnaJ domain signature 104 124 IPR001623 -
Seca10g04025 488 PRINTS DnaJ domain signature 88 103 IPR001623 -
Seca10g04025 488 PRINTS DnaJ domain signature 70 88 IPR001623 -
Seca10g04025 488 Pfam DnaJ domain 68 129 IPR001623 -
Seca10g04025 488 MobiDBLite consensus disorder prediction 465 488 - -
Seca10g04025 488 Pfam Domain of unknown function (DUF3444) 209 413 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04025 Seca-Chr10 86814478 86815944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04025 4 129 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.000 9.03e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04025 - - lja:Lj2g3v0520120.1 325.865