Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04006 ATGACATATGAAGTAAAAAATGGTGTTAGTGATTGGCCTTCAGATCTTCTTAAAGAGTGTGCTTCTATATATGAAGATGATGAAAGTATAATATCTTTAACCTTTGAAAAGCCAACACCTGATCCCTTGCCTCAATTCGATAACTCTTATGAATGCATTCCTCAAGAAGGGATATTATTTAATAGTGACGATGATGCTTATAACTTTTATCGTGGATTTGCATTAAAAAACGGTTTTTCGATTAGACGTGATCATGTTTACAAATCTAGTAAGAATCAATCTGAGGAGAATCCATTAGGTATTTATAAAAGGGAATTTGTTTGTCATCGTGCCGGTTCGGTTAAGGAGCGTAGAATTGTTGAAGGGAATGGTCAACGGAAACGAAAAACTTCAAGATGTAACTGTGGTGCAAAGATGTTGATTGCGAAAAGTATTATTGGCTTTGAGGAAAAATGGGTGGTTAAATATTTTAATAATCACCATAACCATGAGTTATTGGATGATAAAGAGGTTCAATTTCTTCCTGCTTATCGTAACATCCCAATCATTGATCAATATTGTCACAAGCTGGTTGCCCATATTTTTGTGCAGGTTGGTGTGACTGTCAACATTAGAAATCAAGCTGGAGAAGAGGCAAGAATGCGACAAAAGTACCATAATCCTCAAATTAGGACAAGTTTTCCTCTTGAGGAACATGCTACATCTGTACTCACACCTTATGCATTTGAGTTGCTCCAAAATGAGATCAAGTTATCTACAAAATATGCAGCAATTAAACAGGGATGA 786 0.3562 MTYEVKNGVSDWPSDLLKECASIYEDDESIISLTFEKPTPDPLPQFDNSYECIPQEGILFNSDDDAYNFYRGFALKNGFSIRRDHVYKSSKNQSEENPLGIYKREFVCHRAGSVKERRIVEGNGQRKRKTSRCNCGAKMLIAKSIIGFEEKWVVKYFNNHHNHELLDDKEVQFLPAYRNIPIIDQYCHKLVAHIFVQVGVTVNIRNQAGEEARMRQKYHNPQIRTSFPLEEHATSVLTPYAFELLQNEIKLSTKYAAIKQG. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04006 261 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 49 199 - -
Seca10g04006 261 Pfam FAR1 DNA-binding domain 68 166 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04006 Seca-Chr10 86365797 86373730 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g04006 FAR1 2.9e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04006 - - ccaj:109802755 271.552