Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03998 ATGCGTCACGTTGAAGACTTTACCAACATTGATACTGTTGAAGACATCAAATCAATTGACTTTGGGAGTTTGGGGCCACTAGAATTAAGTAATTTTGATTTTGCAAGTCTTGAGATAGCATATAAATTTTATGTGAGGTATGCAAGAGTAGAAGTCTTTGGGGTTCGTAAAAGCAACAAGCCTACAAACAAGGATGGAGTTGTTACAGGTCAAACTTTTGTTTACAACAGAGAAGGTGAAAGAGAGGTCAGAGGGTTGAGGAATGTAGATCGAAAGCGAAAGGAGAAGCCCCAAACTTGGTGTGGGTGTCAAGCGATGTTTCGAGTCCATGTTGATGTTTATAGTGGTCATTGGTATATAATAGTATTTGAAGATGAACATTATCATGAACCTTTAGAGGGTCTTTATTGTGGTATACTACCAGTGCACAGGGAATGA 438 0.3881 MRHVEDFTNIDTVEDIKSIDFGSLGPLELSNFDFASLEIAYKFYVRYARVEVFGVRKSNKPTNKDGVVTGQTFVYNREGEREVRGLRNVDRKRKEKPQTWCGCQAMFRVHVDVYSGHWYIIVFEDEHYHEPLEGLYCGILPVHRE. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03998 145 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 130 - -
Seca10g03998 145 Pfam FAR1 DNA-binding domain 42 130 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03998 Seca-Chr10 86144022 86144459 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g03998 FAR1 1e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03998 - - tpra:123913749 140.584