Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03983 ATGGAAACCCCATTGACACTCACCGGGTTGCTTCGCCGCGCCGCTGAAAGATTCCCCTCCCGCCGTGCCATCTCCGTTGCCGGAAAATTCGACCTCACCCACTCCCGCCTCCACCAATTGGTCGAATTCGCCGCCGGCCGTTTGGTCTCCGCCGGAATCAAGCCTGGCGATGTTGTCGCCCTCACTTTCCCCAACACCGTCGAGTTTGTTGTAATGTTTTTAGCCGTTATTCGAGCGCGAGCCACGGCAGCGCCGTTAAACCCAGCTTACACATCCGAAGAGTTCGAGTTTTATTTATCTGACTCTGAATCAAAGCTTCTGTTAACGCCGTTAGAAGGTAACGAACCGGCTCAATCCGCGGCTTCGAAGCTCAAAATTCCATTAGGCGCGGCTTTGCTTACTCAAGCCGAAGGAGAACAAGCCGAATTGAACGTTTCACTGAACGAGTCAGAGTCTAAGTCCGACTCGGCTAACTCGCTTGCCGGACTCAGTAACGACCTTTCCGACATGGCACTCTTCCTCCACACCTCAGGCACCACGAGTCGCCCGAAAGGCGTGCCGCTGAGTCAGCACAACTTGGCCTCTTCCGTTAGGAACATCGAGTCGGTATACCGACTCACTGAGTCTGACTCGTCGGTGATCGTTCTTCCGTTATTCCACGTTCACGGGTTGATCGCCGGGTTGCTGAGTTCACTCGGTGCCGGCGCGGCGGTGGCGTTACCGGCGGCGGGGAGGTTCTCGGCTTCGTCGTTTTGGAAGGACATGGTAAAGTACAATGCCACGTGGTACACTGCGGTTCCTACCATACATCAGATTATACTTGATCGCCACTTGAATAACCCGGAACCCGTTTACCCGAGGCTCCGGTTTATTCGGAGCTGTAGTGCATCGCTTGCTCCGGTTATTTTGGGTCGGTTAGAGGAGGCATTCGGAGCCCCGGTTTTGGAGGCTTATGCTATGACTGAGGCCTCTCATCTCATGGCTTCAAACCCGTTGCCGCAAGATGGGCCTCACAAGGCCGGGTCGGTTGGGAAGCCCGTGGGCCAAGAGATGGCTATATTGGATGAAACGGGTCGGATCCTTGAAGCTGAGGTTAGTGGTGAGGTTTGTATTCGGGGACCCAATGTGACAAAAGGATATAAGAACAACCTGGAAGCTAATACGACGGCGTTTCAGTTTGGTTGGTTTCATACCGGTGATCTTGGGTACTTTGATTCGGATGGGTACTTGCATCTCGTGGGTCGGATCAAGGAGCTCATTAATAGAGGAGGTGAGAGAAAATATCACCAATAG 1293 0.5367 METPLTLTGLLRRAAERFPSRRAISVAGKFDLTHSRLHQLVEFAAGRLVSAGIKPGDVVALTFPNTVEFVVMFLAVIRARATAAPLNPAYTSEEFEFYLSDSESKLLLTPLEGNEPAQSAASKLKIPLGAALLTQAEGEQAELNVSLNESESKSDSANSLAGLSNDLSDMALFLHTSGTTSRPKGVPLSQHNLASSVRNIESVYRLTESDSSVIVLPLFHVHGLIAGLLSSLGAGAAVALPAAGRFSASSFWKDMVKYNATWYTAVPTIHQIILDRHLNNPEPVYPRLRFIRSCSASLAPVILGRLEEAFGAPVLEAYAMTEASHLMASNPLPQDGPHKAGSVGKPVGQEMAILDETGRILEAEVSGEVCIRGPNVTKGYKNNLEANTTAFQFGWFHTGDLGYFDSDGYLHLVGRIKELINRGGERKYHQ. 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03983 430 Pfam AMP-binding enzyme 12 422 IPR000873 -
Seca10g03983 430 Coils Coil 133 153 - -
Seca10g03983 430 FunFam Peroxisomal-coenzyme A synthetase 6 415 - -
Seca10g03983 430 PANTHER ACYL-COA SYNTHETASE 6 426 - -
Seca10g03983 430 ProSitePatterns Putative AMP-binding domain signature. 173 184 IPR020845 -
Seca10g03983 430 SUPERFAMILY Acetyl-CoA synthetase-like 4 428 - -
Seca10g03983 430 Gene3D - 5 415 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03983 Seca-Chr10 85989192 85993545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03983 31 430 Monolignol Biosynthesis Gene Families AT1G20510 30.340 5.92e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03983 K22133 - gmx:100779306 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03983 10 85989192 85993545 Seca10g03983 10 85989192 85993545 ECH