Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03981 ATGCAATTCGCAGGAACATTAGGTTATACAGCTCCTGAATATGCTATTAGAGGAGAACTATCAGAAAAAGCGGATATCTATAGTTTTGGAGTTCTCTTGCTCGAAATAATCTGTTGCAGGAAAAACACAGATCATACTTTACCATCGGAAATGCAGTACCTCCCTGAATATGTAACTTCTCATTTATCACCTTAA 195 0.3692 MQFAGTLGYTAPEYAIRGELSEKADIYSFGVLLLEIICCRKNTDHTLPSEMQYLPEYVTSHLSP. 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03981 64 Pfam Protein tyrosine and serine/threonine kinase 7 44 IPR001245 GO:0004672|GO:0006468
Seca10g03981 64 ProSiteProfiles Protein kinase domain profile. 1 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03981 64 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 61 - -
Seca10g03981 64 Gene3D Transferase(Phosphotransferase) domain 1 1 64 - -
Seca10g03981 64 SUPERFAMILY Protein kinase-like (PK-like) 2 54 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03981 Seca-Chr10 85843326 85844636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03981 2 57 Receptor kinase-like Gene Family AT1G56120 53.571 7.37e-17 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca10g03981 PK_Tyr_Ser-Thr 8.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03981 - - gmx:100791042 116.316