Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03975 ATGGAGAGTTTGATGTTGTTTGGGGTGGCACTTGCCTTGTTGGTAATGTTAGCTCTCTTCTTGCTCTTGAAACTAATATTTTCTTGGTGGATTTTACCTATCCAAACACATCACAAGCTTAAAAGATGTGGGTTTGGAGGGCCATCCCCAAATTTTCCACTTGGAAACATTCAAGAAATGAAAAAGAAGAATGATTTTAATTCTTCACTTGGGTACTCAAAACTCACCCATGATATACACTCCATTGTGTTTCCGTACTTTTCTCGGTGGCAAAACTCTCACGGGAAGGTATTTATCTACTGGCTGGGGACAGAACCGTTTTTGTACATTGCAGAGCCAGAATTCTTAAAGAAAATGTCCACAGAGGTTATGGCCAAGAGATGGGGAAAGCCCAATGTGTTTAGAGATGACAGAGACCCAATGTTTGGCAAAGGTTTGGTTATGGCTGAAGGCAATGAATGGGTTCGTCACCGACATGTTATAGCCCCAGCATTTTCTCCCCTTAACTTGAAGGCAATGGCAAACATGATGATAGACTCTACAAATCAAATGATAGATAGATGGATTACCCAAATTAACTCCGGAAACCCCGAAATCGATGTGGAGAGGGAGGTTATAGCTACGGCAGGAGAGATCATAGCAAGAACAAGCTTTGGCATGAAAGTGGAAGATGCAAGGAAAGTGTCACAAAAATTCCGGGCCCTACAAATGACACTTTTTAAGACAACAAGATATGTAGGTGTTCCATTTGGCAAGTATTTCAACATCAAGAAAACATTAGAGGCCAAGAAGCTTGGGAAGGAGATTGATAGGCTCTTGATGAGTGTCATAACATCTCGCAAGAAATCATCAATCAAAAGACAAGTTGGAGAAGACATATTAGATTTGTTGTTGCAAGAAAATCATGGGAAGACATTTAGCACACGACAATTGGTTGATGAGTGCAAGACCTTCTTCTTTGCTGGCAATGAGACAACGGCATTGGCTATCTCATGGACTTTGTTGCTTCTAGCTATTCATGAAGATTGGCAAATCCAATTAAGAGATGAAATAAGAGAAGTGGTTGCTGATAAAGAAGTTGATATCAACGTGCTTGCTGGCCTTAAAAAGATGAAGTGGGTGATGAATGAAGTTCTAAGGCTCTATCCAACAGCACCAAATGTGCAAAGGCAAGCGAGAGAAGACATTCAAGTTGATAATTTAAGAGTGCCTAATGGGACAAACATGTGGATTGATGTTGTGGCGATGCATCATGACCAGACATTATGGGGAAAAGATGTGAATGAGTTTAGACCTGAGAGATTCATGGATGATGTTAATGGTGGATGCAACCATAAGATGGGGTACTTGCCTTTTGGATTTGGAGGGAGAATGTGCGTTGGTAGGAACTTGAGTTTTATGGAATATAAGATAGTGTTAACCCTTCTCCTCTCTAGGTTTAGTTTTAGACTTTCCCCTAGCTACATCCATTCACCTTCTATTATGCTCTCCTTGAGGCCCACTTATGGACTTCCTCTCATAGTTCAGCCCCTCTAA 1536 0.4102 MESLMLFGVALALLVMLALFLLLKLIFSWWILPIQTHHKLKRCGFGGPSPNFPLGNIQEMKKKNDFNSSLGYSKLTHDIHSIVFPYFSRWQNSHGKVFIYWLGTEPFLYIAEPEFLKKMSTEVMAKRWGKPNVFRDDRDPMFGKGLVMAEGNEWVRHRHVIAPAFSPLNLKAMANMMIDSTNQMIDRWITQINSGNPEIDVEREVIATAGEIIARTSFGMKVEDARKVSQKFRALQMTLFKTTRYVGVPFGKYFNIKKTLEAKKLGKEIDRLLMSVITSRKKSSIKRQVGEDILDLLLQENHGKTFSTRQLVDECKTFFFAGNETTALAISWTLLLLAIHEDWQIQLRDEIREVVADKEVDINVLAGLKKMKWVMNEVLRLYPTAPNVQRQAREDIQVDNLRVPNGTNMWIDVVAMHHDQTLWGKDVNEFRPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFRLSPSYIHSPSIMLSLRPTYGLPLIVQPL. 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03975 511 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 503 - -
Seca10g03975 511 Pfam Cytochrome P450 80 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Seca10g03975 511 Gene3D Cytochrome P450 30 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 SUPERFAMILY Cytochrome P450 81 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03975 511 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03975 Seca-Chr10 85240687 85245335 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03975 9 511 Cytochrome P450 AT5G52400 58.858 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03975 - - gmx:100784128 853.203