Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03972 ATGTTGAAATGGAATTTGAGTCTATTGAAAAAGTCAGAGAGTTTTATAGATCTTTTGCTAAAAAAAGGGGGTTTTGGAGTACGTATTCGTTCAACTAAACCAAAGAGAGCAGTTTTGGTATGTTGCAATGAAGGTCAACACCAAGTGAAAAGCTCTGGATATGAAGAAATTCAAGATAGCGTCAGTCAAACTAAAAGAAAATGTTCAACCACCCAAAGTGGTTGTCAAGCTTCACTTATTGTTTCAAGAGGAATGACACAAAGTAGTTGGTTTATACAATCTTTTAACAATGATCATAACCATGCCATGGTTAGCCCCAAGAGCGTGTCTTATATGAGGTGTCATAAAAAGATGACCATTACTGCAAAAAATCTTGTTGAAAATTTTGAGGAAGAAGGCTTGCCGACGGGAAAGGTTGCTAAAATTTTGAATGATGGTGACTTAGCTTTCTCTAACAGGAATTTTTGGAATCACATCAAAAATTTACGTAAAGAATGGAAGGACTTAATGATTGAGTATAACTTGGAGGATAATGAATGGCTTTGGGGGCTATATAAGATTAGAGAATCATGGGTGCCAATATATAATAGAAGTACATTCTTTGTTGGCATGAATATTACTGAAAGAAGCGGGAGTATTAATGCATTTTTTTATTCTTTTGTAGATGCATCAACAACATTACAAGAATTTGTGTTAAAGTTTGAGAAAGCAATTGGTAACTGCTTGGATGATGAAAGAAAGGAAGATTATGAATCTAGGCATAAATCGCGTATTTTGAGTACAGGATCCAAGCTTGAGGTGCATGCTGCATCTGTTTATACAAGAAATATGTTTGGTAAATTCCAAGATGAACTTGGGAAGATAAACCAATTTACTAAACATAAGATTAACAGAGATGGGCCTAAATATGTCTATCAGGTGTCTAGTTGTTATGATGCTCAAGATACACACATGTTAGTAATTTTTCAAGCAAAGGGTGTTGCTCAGATTCCGAGTCATTTCATTTTGCAACGTTGGACTAAGGATGCTAACAAAGGTATCGAGGTCAATTATACTGAAGATAATCTTGATGGTCAATCTAATACATCAAGGATTATAAGAAGAATGCATGCACAGCAAGAAGCAAGCATGTTAGTTGATCTTGTTGAGGAGTCTGAGGAGTTGTACAAGTTCATTATCTCAGAACTGAGTCACACTTGTAAGTCAGCTATAGCAATGAAAAAAATTTCAATCATTGGTGATGAGACAACTCTTTTGGATTCAAGCCAAAATTTGAACCATACTTCCATATCAGAGCAGGGGAACGACGCAACACAATTGCCCATTGGAGACCCACACATATCAAAAACAAAAGGGAGAAAGAAGGATGGAGAGAAAGTGGCTCAAAATTGTAGATTTAGAAGTGGGCTTGAAGTATCGCTCAGTAGATCATTAGTTAAAAGGAAATCATGCCATGAGTGTGGGGGACATAGTCACAATAGCAGAACGTGCAAGAAAAGAAATCAAAATGATTCATATACATGTAAGCTTTTCACATTAAATTTTTTTTACTGCATCTGTTTAATTTTTATTATTGTAACTAACTAA 1587 0.3529 MLKWNLSLLKKSESFIDLLLKKGGFGVRIRSTKPKRAVLVCCNEGQHQVKSSGYEEIQDSVSQTKRKCSTTQSGCQASLIVSRGMTQSSWFIQSFNNDHNHAMVSPKSVSYMRCHKKMTITAKNLVENFEEEGLPTGKVAKILNDGDLAFSNRNFWNHIKNLRKEWKDLMIEYNLEDNEWLWGLYKIRESWVPIYNRSTFFVGMNITERSGSINAFFYSFVDASTTLQEFVLKFEKAIGNCLDDERKEDYESRHKSRILSTGSKLEVHAASVYTRNMFGKFQDELGKINQFTKHKINRDGPKYVYQVSSCYDAQDTHMLVIFQAKGVAQIPSHFILQRWTKDANKGIEVNYTEDNLDGQSNTSRIIRRMHAQQEASMLVDLVEESEELYKFIISELSHTCKSAIAMKKISIIGDETTLLDSSQNLNHTSISEQGNDATQLPIGDPHISKTKGRKKDGEKVAQNCRFRSGLEVSLSRSLVKRKSCHECGGHSHNSRTCKKRNQNDSYTCKLFTLNFFYCICLIFIIVTN. 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03972 528 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 22 124 IPR031052 GO:0006355
Seca10g03972 528 MobiDBLite consensus disorder prediction 430 454 - -
Seca10g03972 528 Pfam FAR1 DNA-binding domain 24 104 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03972 Seca-Chr10 85109614 85111834 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g03972 FAR1 6.4e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03972 - - mtr:112420114 436.802