Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03971 ATGAAATCTCAAGAGAGAGAGATGGAGAGTTTGGTGCTACCTGCCTTGTTGGCAATGTTAGCTCTCTTCATGCTCTTGAAACTAATATTTTCTTGGTGGATTTCTCCAATCCAAACACATCACAAGCTTAAAAGATGTGGGTTTGGAGGGCCATCTCCAAGTTTTCCACTTGGAAACATTCAAGAAATGAAAAAGAAGAATGGCTTTATTTCTTCACTTGGGTGCTCGAAACTCACCCATGATATACATTCCACTGTGTTCCCCTACTTTTCTCGGTGGCAAAACTCTCACGGGAAGGTCTTTATCTACTGGCTGGGGACAGAACCGTTTCTGTACATTGCAGAGCCAGAGTTCTTAAAGAAAATGTCCACAGAGATTATGGCCAAGAGATGGGGAAAGCCCAATGTGTTTAGGAATGACAGAGACCCAATGTTTGGCAAAGGTTTGGTTATGGCTGAAGGTAATGAATGGGTTCATCACCGACATGTTATAGCCCTAGCATTTTCTCCCCTTAACTTGAAGGCAATGACAAGCATGATGATAGACACTACAAATCAAATGATAGATAGATGGATGACCCAAATTAACTTTGGAAACCATGAACTTGATGTGGAGAGGGAGGTTATAGCAACAGCAGCAGAGATCATAGCAAGAACAAGCTTTGGCATGAAAGTGGAAGACGCAAATAAAGTGTCTGAAAAAATTCGGGCCCTACAAATGATACTTTTTAAAACAATAAGACATGTAGGAGTTCCATTTGGCAAGTGTACTTTCGACATGAAGAAAACATTAGAGGCCAAGAAACTTGGGAAGGAGATCGATAGGCTCATGTTGAGCGTCATAATAGATCGCAAGAAATCATCAATCAAAAGACAAGCTCGAGAAGACATATTAGATTTGTTGTTGCAATCAAATCATCAAGTTGATGGCAAGTTAGTGAAGACATTTACCACACGCCAATTGGTCGATGAGTGCAAGACCTTGTTCTTTGCTGGAATTGAGACATCAGCGTTGGCTATCTCATGGACTTTGTTGCTTTTAGCTATTCATGAAGATTGGCAAATTCGGTTAAGAGATGAGATAAGAGAAGTAGTCGGTGATAGACAAGTTGATGTCAATGTGCTTGCTGGGTTGAAAAAGATGAAGTGGGTGATGAATGAAGTTTTAAGGCTCTACCCAACTGCACCAAATGTGCAAAGGCAAGCGAGAGAAGACATTCAAGTTGATAATTTAAGAGTGCCTAATGGGACAAACATGTGGATCGATGTTGTGGCGATGCATCATGACCCCACATTGTGGGGAAAAGATGTGAATGAGTTTAGACCAGAAAGATTCATGGATGATCTCAACGGTGGATGCAACCACAAAATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGAATATGTGTTGGTAGGAACTTGAGCTCTATGAAGTATAAGATAGTGTTAACCCTTCTTCTCTCTAGATTTAGTTTTAAACTTTCCCCTAGTTATATCCATTCCCCTTCTATCATGCTCTCACTAAGGCCCACTTATGGACTTCCTCTCATAGTTCAGCCTCTTTAA 1566 0.4106 MKSQEREMESLVLPALLAMLALFMLLKLIFSWWISPIQTHHKLKRCGFGGPSPSFPLGNIQEMKKKNGFISSLGCSKLTHDIHSTVFPYFSRWQNSHGKVFIYWLGTEPFLYIAEPEFLKKMSTEIMAKRWGKPNVFRNDRDPMFGKGLVMAEGNEWVHHRHVIALAFSPLNLKAMTSMMIDTTNQMIDRWMTQINFGNHELDVEREVIATAAEIIARTSFGMKVEDANKVSEKIRALQMILFKTIRHVGVPFGKCTFDMKKTLEAKKLGKEIDRLMLSVIIDRKKSSIKRQAREDILDLLLQSNHQVDGKLVKTFTTRQLVDECKTLFFAGIETSALAISWTLLLLAIHEDWQIRLRDEIREVVGDRQVDVNVLAGLKKMKWVMNEVLRLYPTAPNVQRQAREDIQVDNLRVPNGTNMWIDVVAMHHDPTLWGKDVNEFRPERFMDDLNGGCNHKMGYLPFGFGGRICVGRNLSSMKYKIVLTLLLSRFSFKLSPSYIHSPSIMLSLRPTYGLPLIVQPL. 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03971 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Seca10g03971 521 Pfam Cytochrome P450 81 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 Gene3D Cytochrome P450 33 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 513 - -
Seca10g03971 521 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 SUPERFAMILY Cytochrome P450 81 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03971 521 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03971 Seca-Chr10 84958546 84969358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03971 16 521 Cytochrome P450 AT5G52400 56.556 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03971 - - gmx:100784128 834.713