Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03965 ATGCACCTTCAATTAAGCAGTCTCAGATATAACAAATTGCAAAATCACTGTGCAATGGCTATGGTCTCAACTGGTTTCCACAAAGTGGCTGACTTCTGTGGTAGAAGGGAAAGTTGGAGGCTGCGCCTCAAACTTATCAGGGTTTGGAAGATATCTGCAGTGGCCACTCCTGACAATCCCTTTGTCATGCATATGTTGTTTGTTGACCAGGAGGGTAACTGCATAGAATCTGTCATTCAGAAGCACTTCATGCACCGGTTTGCCAATTCTGTCATAGAAGGGGAGGTTTACAATGTTATTCAGTTCACTGTCACTCGGAATAGTGGGAAATTCAGAGCAACTCACCATGACCACAAGCTAACCTTTAATGCCAACACAAGGATTGTCCCATGTCCGACAGTTGTTATTCCGGGCACCGGTTTGAGCCTCGTGAAGACCTCTGATATCTTGAAGACCAAAGGTTCTTCTCAGTATCTTGTGGATTTCATGGGTATTATTACTGGTATATCAGAAAAGCTGACTCTGAGCAAGGAAGGGAGGCAAACACGCCTCATGCTCATCGATATGGTGGATGAAATGGGAAAGATTAGATGTGCTATTTTCGGGCAACTCATTGACACTGTGAAAGGGTTCCTTACTCTTTCCCGCTGCGGCCTGCTTGTGCTAATCATCCATCTTGCTCGTGTGAATCTTTACAGGGGGGAGGTGGGCATTCAAAACCTATTGAATGCCTCAAAGCTGTTCTGGAACCCTGAAATACCTGAGGCAATAGAGTTCAAAAATAGCCTCGCTGTCCATGAGATAGAAACCGATGTGGAGATCTCTCTGATTTCAGACAATAGGCGCCCCGTCTCTGTGCGCGAGCAATTCCTCACAATTTTTCCTAGGAAACGTGTGGGGGACCTGAACCACATGCTTGAGGATGGAACTTATATAGTTCTTGGTACAATAACAGAGGTCTTCCAGGAAGACGACTGGTGGTACATAGCATGCTCCTGCATAAGGGCTGTTGACTTCAACTAA 1023 0.4555 MHLQLSSLRYNKLQNHCAMAMVSTGFHKVADFCGRRESWRLRLKLIRVWKISAVATPDNPFVMHMLFVDQEGNCIESVIQKHFMHRFANSVIEGEVYNVIQFTVTRNSGKFRATHHDHKLTFNANTRIVPCPTVVIPGTGLSLVKTSDILKTKGSSQYLVDFMGIITGISEKLTLSKEGRQTRLMLIDMVDEMGKIRCAIFGQLIDTVKGFLTLSRCGLLVLIIHLARVNLYRGEVGIQNLLNASKLFWNPEIPEAIEFKNSLAVHEIETDVEISLISDNRRPVSVREQFLTIFPRKRVGDLNHMLEDGTYIVLGTITEVFQEDDWWYIACSCIRAVDFN. 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03965 340 CDD RPA1_DBD_A_like 40 128 - -
Seca10g03965 340 Gene3D - 136 272 IPR012340 -
Seca10g03965 340 SUPERFAMILY Nucleic acid-binding proteins 25 134 IPR012340 -
Seca10g03965 340 Pfam Domain of unknown function DUF223 65 152 IPR003871 -
Seca10g03965 340 Gene3D - 27 133 IPR012340 -
Seca10g03965 340 SUPERFAMILY Nucleic acid-binding proteins 141 266 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03965 Seca-Chr10 84607036 84615881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03965 62 261 Core DNA Replication Machinery Family AT5G08020 20.488 7.60e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03965 - - lja:Lj6g3v0884310.1 254.218