Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03937 ATGTCACTTACTGTAAAACAAGGATTTCCTTTACTTCCGCAGTATTACTTGAGTGCTGGTGCTGCCCTTTTGGATATTGTTCAATCTGAACCTTCCAGTTTTCCTATATCTTCCCAGGAGTTGTTCAGTATACTTGATGATGCTAGTGAAAAAACATGTTTATGTGCTACAGAAGTGTCAACGCAAAGATATATTTTTGATGGAGATGCTGGAAAAATTGGTCTTGAACCAAGAAATGTAATTGCTTGCACAAGTTTCTTGCTAGAACAGAAACTGGTGAAGGCGTGGTTTGCTGACAAGGATGCTGAAGCACTGAGGTGCCAGAAGCAATTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAACAGAAGGCTAGGGAGCAAAAACACAAGGATGAGGCAGAAATTAAAGGGAATATTGACAGTAAAGTAAAGGCTTTATCTAAGGAACAAAGACACAAGGATGAGACAGAAATTAAAGGGAATATTGATAGTAAAGTAAATGCTTTATCTAAGGAACAAAGACACAAGGTTGAGGCAGAAATTAAAGGGAGTATTGACAGTACTGTAAAGGATGAGGAAGAAATTAAAGGGACTATTGACAGTACAGTTAAGGCTTTCTCAGAAACAGAAGCATCCTTGGATACACATAATTTTGAAGCTCTTTACCCAGATAAATTTGCAGATAACACTCCTTCACATGTTCCTTTCCAATGCCCTGACACTAATGAAGGAATAGATGGGGATACTCAGTCTGGGCATGATTTTGGCACTGATCAGAATATTGAGAATTCTCCAATCTCAAAACTTGAGGTCATTCAGAAGCATGAAACCCCCCATGATCAAAGGGCAGCTGCCATAGTTAATGGTACTAAAGCATGGAGTCAAAAGCCTAAACCAGAAATTGACAGGGTGGTTTTAAAATCTATAAAAGAGAAAGAGCCAGACTTCGTTAAGAATCGTGAAGTTTTGATTGGATCCATATCTGTTAATCTTGGCAATTGCAGCCAATCAGAGGGTAATGTGGTGGCATCTAAAGAGGACTGCATGGTTAAGAATGTGGCCAAGCAGAATAGTTCTCAGACTAAACCAATGAAACCTGATTTGGTCATTAGTGGCAACAATCCAGTAACAGTTAAGATTTTGAAGCCAGTTAGTCGGCTTGAAACTAAAGATCCATTTCCAGTTCAAAGTGGTGGGACAGAAGTTGGTGCAGTTTATGGACATGGAGATTGTCAAAACTTGTCAGGGCCAAGTTGTTTAAGGTTGTGTATAGATGGTAGTGATATTGGTTTTGAAAACAATATCTCCCATGTAGGAGGTAGACTTAATCTAGGAACCTTACGGTTATCCAGCCATGCTGCAAAAGCCTTTCTTGCACAAAGATGGAAAGAAGCCCTCTCATCAGATCATGTGAAATTGGTTGTTTCCCTTGACTCTGAACCTCCTGGGTGCGAGGAGATAGCAGCATGTCAATCTTCTGATCTCGACAGATGCAACATTCTGGCAAATGCAGAGAACAGGTTGCCTGCAACCTCCGGAGTTTCTAAATCCAAACCCAGAATGAAGTCCGAAAAGGGAACCAAGACATAA 1641 0.4046 MSLTVKQGFPLLPQYYLSAGAALLDIVQSEPSSFPISSQELFSILDDASEKTCLCATEVSTQRYIFDGDAGKIGLEPRNVIACTSFLLEQKLVKAWFADKDAEALRCQKQLVEEEEAAQKRQAEILERKRQKKLRQKEQKAREQKHKDEAEIKGNIDSKVKALSKEQRHKDETEIKGNIDSKVNALSKEQRHKVEAEIKGSIDSTVKDEEEIKGTIDSTVKAFSETEASLDTHNFEALYPDKFADNTPSHVPFQCPDTNEGIDGDTQSGHDFGTDQNIENSPISKLEVIQKHETPHDQRAAAIVNGTKAWSQKPKPEIDRVVLKSIKEKEPDFVKNREVLIGSISVNLGNCSQSEGNVVASKEDCMVKNVAKQNSSQTKPMKPDLVISGNNPVTVKILKPVSRLETKDPFPVQSGGTEVGAVYGHGDCQNLSGPSCLRLCIDGSDIGFENNISHVGGRLNLGTLRLSSHAAKAFLAQRWKEALSSDHVKLVVSLDSEPPGCEEIAACQSSDLDRCNILANAENRLPATSGVSKSKPRMKSEKGTKT. 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03937 546 MobiDBLite consensus disorder prediction 526 546 - -
Seca10g03937 546 MobiDBLite consensus disorder prediction 129 152 - -
Seca10g03937 546 Coils Coil 102 151 - -
Seca10g03937 546 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03937 Seca-Chr10 83733534 83737235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03937 1 545 C2H2 Transcription Factor Family AT4G25610 35.379 1.30e-62 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03937 - - gmx:100809067 590.112