Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03927 ATGAAATATGCTTTTGGAGGAGAGCTGATTGAGAGAATATGCAATGCAGGGCAGTTCAGTGAGGATGAGGCACGCTTCTTTTTCCAACAACTCATATCAGGTGTTAGCTATTGTCATGATAAGCAAGTATGCCATCGTGACTTGAAGTTGGAGAACACATTGTTGGATGGAAGTCCTGCTCCTCGTTTGAAGATATATGATTTTCTTTATATTGCTTTTTATTTTTTGAGAATTTCAGATACATACTACCTGCATTCCAGGTTGTGGTGTTTGCTTGAATTTCAACTGGTCATTGTTTAG 300 0.3833 MKYAFGGELIERICNAGQFSEDEARFFFQQLISGVSYCHDKQVCHRDLKLENTLLDGSPAPRLKIYDFLYIAFYFLRISDTYYLHSRLWCLLEFQLVIV. 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03927 99 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03927 99 PANTHER SERINE/THREONINE KINASE 1 72 - -
Seca10g03927 99 Gene3D Transferase(Phosphotransferase) domain 1 1 89 - -
Seca10g03927 99 SUPERFAMILY Protein kinase-like (PK-like) 1 68 IPR011009 -
Seca10g03927 99 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Seca10g03927 99 Pfam Protein kinase domain 1 68 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03927 Seca-Chr10 83233389 83233874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03927 1 68 CBL-interacting serine-threonine protein kinases AT2G26980 55.882 1.01e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Seca10g03927 Pkinase 2.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03927 K14498 - atri:130808962 131.339