Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03910 ATGATTGCAGGACCTAAGAAGATTTGTTATTATGAATTTTTAACTACAACAAACAACTTTGAAGAGAAACATAAGCTTGGACAAGGTGGTTTTGGTGGAGTTTATAAAGGTTATTTGACAGCTTCAAACTCATATGCTGCTATAAAAAGGATATCAGCAAATTCAAGACAGGGTATAAAGCAATACGCAGCAGAAGTGAATATCATCATCCAATTGAGGCATATGAATTTGGTAAAACTCACAGGTTGGTGCAACAAGAAGAATGATCTCCTACTGATATATGAGTACATGGGTTATCTAGCCCCTGAATATATGAACTCCGGCAAGTGTCGAAAGGAATCTGACATATTCAGTTTTGGGGTTGTTTTGTTGGAGTTAGCCCGTGAAAGAAGAGCCATTCATCACCAAGAGATGGAGGGTGAAGTATCATTAGTTGAGTGGGTGTGGGAGCTCTATGGATTGAGAAATCTCTTTGCAGCAGCAGACCCAAAGCTTTGTGGAGTATTTGATGTGCAGCAAATGGAACGTTTACTGGTTGTTGGCCTTTGGTGTGCTATTCCAGATTGCAAATCCAGGTCCTCTATAAAGAAAGTGATTAAAGTGCTTAACTTTGAAGCTCTTTTACCAATTCTCCCACAAATGGTCCCTGTGCTAGCCTATTTCCCTCCAACAACAAATGAGTTATTTTTCGCAGTTTCATCTTCCTTAAAGGCTACATGTTAA 723 0.3914 MIAGPKKICYYEFLTTTNNFEEKHKLGQGGFGGVYKGYLTASNSYAAIKRISANSRQGIKQYAAEVNIIIQLRHMNLVKLTGWCNKKNDLLLIYEYMGYLAPEYMNSGKCRKESDIFSFGVVLLELARERRAIHHQEMEGEVSLVEWVWELYGLRNLFAAADPKLCGVFDVQQMERLLVVGLWCAIPDCKSRSSIKKVIKVLNFEALLPILPQMVPVLAYFPPTTNELFFAVSSSLKATC. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03910 240 FunFam receptor-like protein kinase FERONIA 2 96 - -
Seca10g03910 240 PANTHER - 97 206 - -
Seca10g03910 240 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Seca10g03910 240 Gene3D Transferase(Phosphotransferase) domain 1 95 205 - -
Seca10g03910 240 ProSiteProfiles Protein kinase domain profile. 20 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03910 240 SUPERFAMILY Protein kinase-like (PK-like) 6 226 IPR011009 -
Seca10g03910 240 Pfam Protein kinase domain 20 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03910 240 Gene3D Phosphorylase Kinase; domain 1 5 94 - -
Seca10g03910 240 Pfam Protein tyrosine and serine/threonine kinase 99 128 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03910 Seca-Chr10 82592284 82593269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03910 3 97 Receptor kinase-like Gene Family AT5G10530 48.421 3.00e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca10g03910 Pkinase 2.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03910 - - cam:101492002 207.223