Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03859 ATGGAGGGAGATCAGTTGTTGTTGATATATGAATACATGGAAAACAATAGCCTTGCCCGTGCTTTGTTTGTTGGAAATGAAGCCCGGGAAAAAGGTCAATTGATGTTGGATTGGTCAACAAGGAAGAGGATTTGTGTTGGTATTGCTAGAGGCTTGGCCTACCTCCATGGAGAATCAATGCTAAAGATAGTTCACAGGGACATCAAGGCCACTAATGTGTTACTTGATAAAGATCTCAATCCAAAGATATCTGATTTTGGCTTGGCCAAGCTCAAAGAAGAGGGCTATACCCATATAACCACCAGAGTAGCTGGCATTTATGGATATATGGCTCCGGAGTATGCAATGCATGGTTATTTGACTGAGAAAGCAGATGTATATAGTTTTGGAGTCGTTGCTTGGGAAATTGTTAGTGGAAAGAGCAACACCATGAATTGGCCAAAGAAGAATGCTTCTCTCTTGTTGATTGGGTGCATATCTTGA 483 0.4141 MEGDQLLLIYEYMENNSLARALFVGNEAREKGQLMLDWSTRKRICVGIARGLAYLHGESMLKIVHRDIKATNVLLDKDLNPKISDFGLAKLKEEGYTHITTRVAGIYGYMAPEYAMHGYLTEKADVYSFGVVAWEIVSGKSNTMNWPKKNASLLLIGCIS. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03859 160 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 150 - -
Seca10g03859 160 Pfam Protein tyrosine and serine/threonine kinase 3 149 IPR001245 GO:0004672|GO:0006468
Seca10g03859 160 SMART serkin_6 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03859 160 FunFam Os07g0541700 protein 13 106 - -
Seca10g03859 160 ProSitePatterns Serine/Threonine protein kinases active-site signature. 63 75 IPR008271 GO:0004672|GO:0006468
Seca10g03859 160 Gene3D Transferase(Phosphotransferase) domain 1 1 156 - -
Seca10g03859 160 SUPERFAMILY Protein kinase-like (PK-like) 2 147 IPR011009 -
Seca10g03859 160 ProSiteProfiles Protein kinase domain profile. 1 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03859 Seca-Chr10 80752283 80754105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03859 1 155 Receptor kinase-like Gene Family AT1G53420 70.323 1.36e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca10g03859 PK_Tyr_Ser-Thr 2.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03859 - - gmx:100786496 258.84