Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03856 ATGAATTTAAGTTCGCCTCATCATTTCTTCTTTATCTTGCTCCTTGTTACTTCTTGCTTTGCCTCGTTAGCATTTGGAGCCACCCTGTCACTGTCAGAAGATGAAGTGCAAGCTCTGAAAGATATAGGTAAGACACTTGGACAGAGTAACTGGACATCATCTGTTCAAGTGAAAGGGAACCAAAATGCTGTCAGCTGCAATTGCTCTTTTGCTAATGCCACAGCCTGCCATGTTGTTAGCATACAAGCTTCTAATAAAGATTTTCTGTGTTTTACTTATGATTTTCGTGTTTGGATGAATAATCATCGTTACAGTGTTCTCAAGTCTCAAAATCTTACGGGCACACTCCCAAGTGAACTGGTGAAGTTGCCTTACCTGCAAGAAATTGACCTCACGCGCAACTACCTTAATGGTACAACAATCCCTCCGCAATGGGGCTCCATGAACATTGTCAACATGTATTCTCTCCCTCACCCTTTCTCTGATTCCCTTTCCCTTCATGGAAACCGAATAACGGGTCCAATCCCAAAAGAACTAGGAAACATCACCACCCTGAAAAGTTTGGTCCTGGAGTTCAATCAATTATCTGGAAAGCTTCCTCCAGAGCTTGGAAACCTTCCCCAGCTTGAAATACTGCTTCTCACCTCCAACTATTTTACTGGAAATTTACCTGCAGCATTTGCTAAGCTCACTACGCTAAAGCACCTTCGACTTGGCGATAATCAATTCTCTGGAGCCCTACCCAATTTCATCCAAAGCTGGACAAGTCTGGAGAGGCTGGTGATGCAAGGGAGTGGTTTGAGTGGCCCAATTCCTTCTGGAATTTCATTTCTAAAAAACCTCAATGACTTGAGAATTAGTGACCTGAAAGGAGCAGATTCTTATTTTCCGCAGCTTAATAACTTGACAAATTTGCAAACACTAGTACTGGGGAGCTGCAATCTTATAGCAACTGTTCCTGAATATCTTGGAAATCTGACTAATTTAAGATCATTATATTTAACTGGAAACAATTTTACTGGACCACTTCCCAACTGGATAGCTAGACCAGACTACACGGGAATGGTTCCATGTTTGGGAAACACTAACTGTCCTAGAATTTGGTACTCTCTCCATATAAATTGTGGTGGAAAGCTCATAACTTCTAATGAAAGTACGACATATGAAGATGATTCATATGAAGCCGGACCTGCAACATCTTACCGGACTGGATCAAACTGGGCAGTTAGCAACACAGGTCACTTCTTTGATAGCAGCCTCAAAGAAGACTACTATACCTGGTCTAATTCAACTAAGCTTCCTATGGAAAATGGTGAATTGTATATGGATGCACGTGTTTCTCCCATTTCTCTCACATATTATGGATTTTGCTTGGGAAATGGAAACTACACAGTAAATCTCCATTTTGCTGAGATAATGTTCACTAATGATCAAACATATTCCAGCCTCGGAAGGCGTGTATTTGACATCTATATTCAGAGGAAGTTAGTGCTGAAGGATTTCAATATTGCAAAAGAAGCAGGAGGAGTTGGTAAGGCAATCATAAAAAAGTTCACTGCTACTGTGGCTAGTAATACATTAGAGATTCGCTTTCATTGGGCTGGGAAAGGGACAACTAGTATCCCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTTGATCCTGACTTTACACCCCCATTGGAAAATGGAAGAAGCATACTTGTGCGATCTATTGTTGCAATTGTAGTTGTTGGAGCACTTGTTATCATCATAGTATTTGGTATAGCTTGGTGGAGAGGATGTCTACGACTGAAAGGTTCATTAGAAAGAGATGGCACCGTCATAGCAGTTAAGCAACTTTCTTCTAAATCAAATCAAGGGAATCGTGAATTTATAAATGAGATTGGAATTATTTCTGCTTTACAACACCCTTGCCTAGTTAAGCTCTATGGCTGTTGTATGGAGGGAGATCAGTTGTTGTTGATATATGAATACATGGAAAACAATAGCCTTGCCCGTGCTTTGTTTGCCCGGGAAAAAGGTCAATTGATGTTGGATTGGTCAACAAGGAAGAGGATTTGTGTTGGTATTGCTAGAGGCTTGGCCTACCTCCATGGAGAATCAATGCTAAAGATAGTTCACAGGGACATCAAGGCCACTAATGTGTTACTTGATAAAGATCTCAATCCAAAGATATCTGATTTTGGCTTGGCCAAGCTCAAAGAAGAGGGCTATACCCATATAACCACCAGAGTAGCTGGCATTTATGGATATATGGCTCCGGAGTATGCAATGCATGGTTATTTGACTGAGAAAGCAGATGTATATAGTTTTGGAGTCGTTGCTTGGGAAATTGTTAGTGGAAAGAGCAACACCATGAATTGGCCAAAGAAGAATGCTTCTCTCTTGTTGATTGGGTAA 2412 0.4084 MNLSSPHHFFFILLLVTSCFASLAFGATLSLSEDEVQALKDIGKTLGQSNWTSSVQVKGNQNAVSCNCSFANATACHVVSIQASNKDFLCFTYDFRVWMNNHRYSVLKSQNLTGTLPSELVKLPYLQEIDLTRNYLNGTTIPPQWGSMNIVNMYSLPHPFSDSLSLHGNRITGPIPKELGNITTLKSLVLEFNQLSGKLPPELGNLPQLEILLLTSNYFTGNLPAAFAKLTTLKHLRLGDNQFSGALPNFIQSWTSLERLVMQGSGLSGPIPSGISFLKNLNDLRISDLKGADSYFPQLNNLTNLQTLVLGSCNLIATVPEYLGNLTNLRSLYLTGNNFTGPLPNWIARPDYTGMVPCLGNTNCPRIWYSLHINCGGKLITSNESTTYEDDSYEAGPATSYRTGSNWAVSNTGHFFDSSLKEDYYTWSNSTKLPMENGELYMDARVSPISLTYYGFCLGNGNYTVNLHFAEIMFTNDQTYSSLGRRVFDIYIQRKLVLKDFNIAKEAGGVGKAIIKKFTATVASNTLEIRFHWAGKGTTSIPFGSVYGPLISAISVDPDFTPPLENGRSILVRSIVAIVVVGALVIIIVFGIAWWRGCLRLKGSLERDGTVIAVKQLSSKSNQGNREFINEIGIISALQHPCLVKLYGCCMEGDQLLLIYEYMENNSLARALFAREKGQLMLDWSTRKRICVGIARGLAYLHGESMLKIVHRDIKATNVLLDKDLNPKISDFGLAKLKEEGYTHITTRVAGIYGYMAPEYAMHGYLTEKADVYSFGVVAWEIVSGKSNTMNWPKKNASLLLIG. 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03856 803 FunFam Os07g0541700 protein 663 752 - -
Seca10g03856 803 ProSiteProfiles Protein kinase domain profile. 584 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03856 803 Gene3D Ribonuclease Inhibitor 34 156 IPR032675 -
Seca10g03856 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672|GO:0006468
Seca10g03856 803 Pfam Leucine Rich Repeat 328 347 IPR001611 GO:0005515
Seca10g03856 803 Gene3D Transferase(Phosphotransferase) domain 1 664 801 - -
Seca10g03856 803 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 223 290 - -
Seca10g03856 803 SUPERFAMILY L domain-like 84 349 - -
Seca10g03856 803 Pfam Malectin domain 370 554 IPR021720 -
Seca10g03856 803 Pfam Protein tyrosine and serine/threonine kinase 604 795 IPR001245 GO:0004672|GO:0006468
Seca10g03856 803 SMART serkin_6 584 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca10g03856 803 Gene3D - 369 558 - -
Seca10g03856 803 Gene3D Phosphorylase Kinase; domain 1 596 663 - -
Seca10g03856 803 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 592 - -
Seca10g03856 803 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 368 559 - -
Seca10g03856 803 Gene3D Ribonuclease Inhibitor 157 367 IPR032675 -
Seca10g03856 803 SUPERFAMILY Protein kinase-like (PK-like) 603 792 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03856 Seca-Chr10 80640580 80656110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03856 107 801 Receptor kinase-like Gene Family AT1G53420 52.041 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca10g03856 PK_Tyr_Ser-Thr 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03856 - - gmx:100786496 1117.83