Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03799 ATGTCCCTAAAACTTAGTGACCCGGTTGAATACTTTAGAACATGCATATACCTGCCTCCCCGGGTGAATTCAGATATCCCATGGTGTAATTTAAAAGGTTCTAAGATGCTTCCAATAAATTCTTTGCCAGTGTTGGAGATGCAGATGTGTCTGATCTTTCTCGGTACTCTTTTTTCCCATACAATTCTATGTCGTTTTGGAATCCCCAGATTCACTTCTATGAGCATTGTTGGCATAATCTTTGGAACTACCTTCAATGAAACATGGGTTACTATAAGTGAGAGGCTGTTCTACTTTGATTCACAAGAGAATTTGGGGTTATTTTCATTGTTTGGTTTCATGCTTTTTATGTTCTACATTGGGGTCAAAACAGATATGAGTGTGGTCTATAGGACTAGAAGGAGAGCCACCAATATTGGTTCTATTGCCATAATGGCTCCCTTTCTATGTGGCATGGCTGTTCTGCGTTTTCACTCATCAAAATACCTAGATACAGTAAATGCAACAAAACTTGGAATTGTCATTTCATTGTTAAGTGGAACCTCTTTCCCTGTTATTTCCTCAGTTTTAGGTGACTTGAAGATCTTGAATTCAGAGCTGGGTCGATTAGGCCAATCCTCAGCACTAGTTAGTGAGATGTTCAATATATTCTTGACATCATTCCTGCAATTCATAAGGTTAATGATCCAATATGGTGTACTAAGAGCCTTGATTTGTGTGGCAGCTACAATTTTGTTTGTATTCTTGGTTATATTCATCATACGCCCAGCCATGTTTTGGATTATAAGACAGACACCAGAAGGTTCCCCTGTGAATGATCACTATGTATATTGCATACTCATAATGGCTCTCTTGTCATCATATGCTACACATCGCTTTGGATTCTCTGCTCTTATGGGGCCTTTTATTTTGGGTTTGGCTATTCCAGAAGGACCTCCATTAGGCACTGCCATCATTAAAAAGATTGATACTTTTTGTTATGGAGTTTTGACTCCTATCTTTGTGACTACATGTGCAATGAGGGTAGATCTCACAGACTTCATGGATTGGAAGGAGGAAGAGGATGGAAGAGTTGATGAATTCATGGTACAAACCTTGATTATTGTTGTAGTAACTTTTGTTGCCAAATTTGTTGCCTGCATGGTACCTCCTTTATGCAGTGAGATGCCATTGAATGATGCTGCATCTCTCTCTTTCGTTATGAGCTGCAAAGGCATAGTTGATATGGCTGGACTCTCCTTTGTCAGAGATGTCATAGGCATACCTGATAATGTCTACGCTTTATTGATGATATACATCATAGTGAATGCCACATTCATGCAATTGCTCTTGGGTTTTTTCTACGACCCTATGAAGAAATACACAGGTTACACAAGGAGGAACATCATTGATCTCAGAAAAAACATGGAGCTTCGAGTTCTGACATGCATTCACAGATCAGACAACATTCCCCCAACAATAAACCTGTTAGAGGCAACATACCCCACAAGAATGGAACCACTTTCTGTGTATGTGCTTCAACTCATAGAGCTAATTGGAAGAGCCTCCCCAGTTTTCATCTGCCACCAATTGCAAAGGAAGAAAAAAGCTGATTGCAACAGTTCCATGGCAGAGAAACTCCTTGATGCTTTCAAAAACTTTGAAAGAGAGTTCAATGATGCATTAATTGTGAACACTTTCACAGCTATCTCACCAGCTGAGATGATGTATGATGATATTTGCACTTTAGCACTTGACAAGTTTACATGCCTTATAGTCCTTCCCTTTCATAGAAAATGGTCATCAGATGGTAACTCCATTGAGCTAGAAGATGAGTCTTTAAGAGACTTAAACTACAGAGTTATGGAAAGAGCACCATGTTCTGTTGGTGTACTAATTGAGAGAGCACAAATGACACATATTTTCTCACCAGAGACACCTTACACTGTTTGTTTGCTTTTCATAGGAGGGAAAGATGATAGAGAGGCACTTTTCTTTGCCAAGAGAATGACCAAGAATCCACATGTTAGGCTCACTGTGGTGAGGTTCTTAGCTTCTGTTGGAGACTCAAATGATTGGCAGACATTGCTTGACAATGAGTTGCTCAATGAAATTAAGATGAAAAACAAAGTGGGGGATGCTTATGTGAAATACATAGAGGAGATTGTGCAAGATGGACCTGAAACAGCATTGGTGATTCGTTCATTGGTGACTGAGTATGATTTGATCATTGTTGGAAGACAAGCAGGGGTTGAAAGTCCTCAAACTTCAGGGTTGTTGCAGTGGAGTGAGTATCCAGAACTTGGGGTGTTAGGGGACTTGTTAGCATCAACTGATGCAGCTGGCAAAGCTTCAGTGTTTGTCATACAGCAACAAAGAACAGCCATGGATGTTTGA 2376 0.3994 MSLKLSDPVEYFRTCIYLPPRVNSDIPWCNLKGSKMLPINSLPVLEMQMCLIFLGTLFSHTILCRFGIPRFTSMSIVGIIFGTTFNETWVTISERLFYFDSQENLGLFSLFGFMLFMFYIGVKTDMSVVYRTRRRATNIGSIAIMAPFLCGMAVLRFHSSKYLDTVNATKLGIVISLLSGTSFPVISSVLGDLKILNSELGRLGQSSALVSEMFNIFLTSFLQFIRLMIQYGVLRALICVAATILFVFLVIFIIRPAMFWIIRQTPEGSPVNDHYVYCILIMALLSSYATHRFGFSALMGPFILGLAIPEGPPLGTAIIKKIDTFCYGVLTPIFVTTCAMRVDLTDFMDWKEEEDGRVDEFMVQTLIIVVVTFVAKFVACMVPPLCSEMPLNDAASLSFVMSCKGIVDMAGLSFVRDVIGIPDNVYALLMIYIIVNATFMQLLLGFFYDPMKKYTGYTRRNIIDLRKNMELRVLTCIHRSDNIPPTINLLEATYPTRMEPLSVYVLQLIELIGRASPVFICHQLQRKKKADCNSSMAEKLLDAFKNFEREFNDALIVNTFTAISPAEMMYDDICTLALDKFTCLIVLPFHRKWSSDGNSIELEDESLRDLNYRVMERAPCSVGVLIERAQMTHIFSPETPYTVCLLFIGGKDDREALFFAKRMTKNPHVRLTVVRFLASVGDSNDWQTLLDNELLNEIKMKNKVGDAYVKYIEEIVQDGPETALVIRSLVTEYDLIIVGRQAGVESPQTSGLLQWSEYPELGVLGDLLASTDAAGKASVFVIQQQRTAMDV. 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03799 791 Gene3D - 45 455 IPR038770 -
Seca10g03799 791 Pfam Sodium/hydrogen exchanger family 50 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca10g03799 791 PANTHER CATION/H + ANTIPORTER 41 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03799 Seca-Chr10 78526224 78529902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03799 41 786 Antiporter Super Family AT5G22900 36.317 4.32e-168 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03799 K26731 - gmx:100785558 1129.01