Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03787 ATGAAAGAAATGAACACCGAAATTGCATGTATCAGCCTAGGAAATGTCCAAGTAATCCCTGTGACTTGCCCTGCCATAGCTTGTGAATTCTTGAGAAAACATGATGCAAATTTTGCATCAAGACCAAAAACCATGGCCACTGATATCATCAGTGGTGGTTATTTGACAATAGCTATTATACCCTTTGGGGAACAATGGGAGAAAATGAAGAAAATCTTTGTCAATAAATTGTTCTCCCCACTCAATCATAAATGGCTTCAAGACAAAAGGAATGAAGAGGCTGACAACCTCATCTTTTATGTCTACAATAAATGCAAAAATGTGAATGATGATCTTGGCCTTGTAAATGTCAGAATTGCTACAAGACATTATTGTAGTAATGTGATGAGGAAACTTGTTTTTAACACAAGGTACTTTGGTAAAGGTAGGGAGGATGGAGGGCCTGGTCGTGAGGAAACAGAATATGTAGATGCCCTTTTCACATTGCTTAGACACGTTTATGCCTTTTGTGTTTCTGACTATATGCCAATCTTGAGGGGTATTGACTTGGATGGTCATGAGAGAAAGGAACTTGTGCTTGGAGGAGTGGACAATCCATCAAATGCAGCGGAATGGGCACTTGCAGAAATGATAAATCAACCAGATTTGCTTCAGCGAGCCACTGAAGAATTGGACAATGTTGTAGGTAAACAGAGGCTGGTTCAGGAATCAGATATTTCAAAGCTCAATTATGTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCATTTAGTCCTTTTAATCCTCCCCATGTCTGTATGAATGAAACAAAAGTCGGCAATTACCTAATCCCAAAGGGTAGCCATGTCTTGCTAAGCAAACAAGGCCTTGGAAGAAACTCAAAAGTATGGAATGATCCCCTTAAGTTTAGGCCAGAGCGCCACCTAAAAAGTGATGGATCCATGATAGTTTTAGCAGAACCAGATTTAAGGTTCATATCATTTAGTACAGGAAAGCGAGCTTGTCCTGGAGTTGTGCTTGGCACCACAATGACTGTGATGTTATTGGGTAGGTTGCTTCAAGGCTTCACTTGGAGTGCACCTCCTAACATGTCAAGCATCAAACTTGACAAGTGCAGCGGTGAAATTTTCCTTACTGGACCACTTGTGGCAGTTGCAAAGCCAAGATTAGCACCAAAATTGTACCACCTACAAATTAAGTGA 1206 0.408 MKEMNTEIACISLGNVQVIPVTCPAIACEFLRKHDANFASRPKTMATDIISGGYLTIAIIPFGEQWEKMKKIFVNKLFSPLNHKWLQDKRNEEADNLIFYVYNKCKNVNDDLGLVNVRIATRHYCSNVMRKLVFNTRYFGKGREDGGPGREETEYVDALFTLLRHVYAFCVSDYMPILRGIDLDGHERKELVLGGVDNPSNAAEWALAEMINQPDLLQRATEELDNVVGKQRLVQESDISKLNYVKACAREAFRLHPFSPFNPPHVCMNETKVGNYLIPKGSHVLLSKQGLGRNSKVWNDPLKFRPERHLKSDGSMIVLAEPDLRFISFSTGKRACPGVVLGTTMTVMLLGRLLQGFTWSAPPNMSSIKLDKCSGEIFLTGPLVAVAKPRLAPKLYHLQIK. 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03787 401 PANTHER CYTOCHROME P450 98A9 5 188 - -
Seca10g03787 401 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 329 338 IPR017972 GO:0005506|GO:0016705
Seca10g03787 401 Gene3D Cytochrome P450 189 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03787 401 SUPERFAMILY Cytochrome P450 7 390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03787 401 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03787 401 PRINTS E-class P450 group I signature 246 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03787 401 PRINTS E-class P450 group I signature 326 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03787 401 PRINTS E-class P450 group I signature 287 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03787 401 PRINTS E-class P450 group I signature 336 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03787 401 Gene3D Cytochrome P450 1 188 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03787 401 Pfam Cytochrome P450 190 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca10g03787 401 Pfam Cytochrome P450 7 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03787 Seca-Chr10 77962845 77964961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03787 1 396 Cytochrome P450 AT5G05260 43.261 6.24e-123 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03787 - K12153 vra:106770481 562.762