Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03779 ATGGAGTTTAATAGCATAGATGATGCTTGGAATTTTTGGAGTGGTTATGGTGCTAAAACTGGATTTGGTGTTAAAAGACAATGGCACAACAAAGGTAAAAAAGATGGAATGATTACTACATGTAGATTTGTGTGTTGCAAGAAGGGTGTATGTAAAAAGGATAAACGAGACTATTTGATTTCTAATCCTAGACCTGAAACTTGA 204 0.3431 MEFNSIDDAWNFWSGYGAKTGFGVKRQWHNKGKKDGMITTCRFVCCKKGVCKKDKRDYLISNPRPET. 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03779 67 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 67 - -
Seca10g03779 67 Pfam FAR1 DNA-binding domain 11 66 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03779 Seca-Chr10 77749039 77749242 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g03779 FAR1 7.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03779 - - bvg:104899229 80.8777