Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03747 ATGACCACAACAGCAAGTGTTGGCATGGAATTTGATAGTGTGGATGAAGCTTGGCATTTTTGGGGTGAATATGGTAAAAAAATTGCCTTTGGTGTTAGAAAACAATACTTCAACAAAAGGAAGAAAGATGACTTCGTTAGATCATGTAGATTTGTTTATTGCAAGGAAGGTCGGCGGACATCGGACAAAAGATCCTTTTTGGTTAAGAAGCCTAGGGCTGAAACAAGAACTTATTGCAAGGCGAGAATCGCACTTAGTGCAAAGAATGGAAAGTTTGTCATCCATGAGTTCATAGAGGTTCATAACCTCCCTTTACAATTTGCAGAAACAACACATATGTTAGCATCACATCGTAAAATATTTGAAGCTCAAGCATATGAGATTGAAATGACAGAGGACTCTGGATTAATGCAAAAGGCCTCATTTCAACTTATGAGCACACATGCAGGAGGTAGAGCTAATCTCGGATTTACAAGGTTGAATGCCAAGGACTATCTCCAAGCAAGAAGACAACGTAGTATGGTGTATGGGGAAGTCGGCAGTCTCATGCGGTATTTTGAGCACCAATTATTGGAGAATCCTTCATTTTACCATGCATATCAAATGGATTGCGATGAACAAATGACATGTATTTTGGGCTAA 642 0.3941 MTTTASVGMEFDSVDEAWHFWGEYGKKIAFGVRKQYFNKRKKDDFVRSCRFVYCKEGRRTSDKRSFLVKKPRAETRTYCKARIALSAKNGKFVIHEFIEVHNLPLQFAETTHMLASHRKIFEAQAYEIEMTEDSGLMQKASFQLMSTHAGGRANLGFTRLNAKDYLQARRQRSMVYGEVGSLMRYFEHQLLENPSFYHAYQMDCDEQMTCILG. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03747 213 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 160 - -
Seca10g03747 213 Pfam FAR1 DNA-binding domain 20 105 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03747 Seca-Chr10 74494245 74494886 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca10g03747 FAR1 2.5e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03747 - - mtr:112419311 304.293