Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03728 ATGCAGCAAAACTTATCTTCAGATTATAGTTTCTCTACCATAGCCATTGGTATGCCAATTGCAAACTACAGGGATGAGTTGTACAAGGAGTGTCTTGAAGCATTACAAGGCGGGTTACTATTAGTTGGGAATGGTTTAAAGGAGGATGAATCAGGTGCTACGACAACTTCGGTGTTCATAGGAGATGATAAGCTGCTAATTTCACATCTTGGTGACTCATCTGAGTATCAATACCTAAAATTATTAAGGCACGTACACATGGAGAAGCTCTTCTCTGGCAGATGCAACTTGCAGTATGTTCCAGAGTCTTATATACTGCCACTAGAAAGCAAACCCGGGAAAGAAGCTCCTCTCTGCAACATGGTACCAGTAATTGATCTTGGAGGAGAATTAGGTTGTGATAATTTAAGCCTGAATCAGCAAATTATAAAGGCTAGCCAAGAATTTGGATTCTTTCAGGTTCTGCCATCTACTTTTTCCCCCTCCCTGTTTAATAAAATTGATCGAAAATGA 513 0.3996 MQQNLSSDYSFSTIAIGMPIANYRDELYKECLEALQGGLLLVGNGLKEDESGATTTSVFIGDDKLLISHLGDSSEYQYLKLLRHVHMEKLFSGRCNLQYVPESYILPLESKPGKEAPLCNMVPVIDLGGELGCDNLSLNQQIIKASQEFGFFQVLPSTFSPSLFNKIDRK. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03728 170 SUPERFAMILY Clavaminate synthase-like 95 166 - -
Seca10g03728 170 Gene3D - 81 169 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03728 Seca-Chr10 73523049 73527214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03728 24 73 PP2C-type Phosphatase Gene Family AT4G27800 38.961 1.24e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03728 - - jre:108994458 84.7297