Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03721 ATGCTCCAGTCCATATGCTACGAGCTTGGTTCCCTTCAGCTTCTTGATCAAAGAAAGCTCGCTCTAGAAACAATCTACTTGGATATTCGGGATTCAACAGATGGCTGGAATGCCATACAGGATATGGTGGTCCGAGGAGCACCTGCTATGCTGTATGTACATTGTAACTCGATCACATTCAAACAAATTAAATGGAAGCTAGCCAACAAACCCAGTGATGTTGTTTCCTTACTGCAGAAGAAATTAGACTATCTTGTCTCAAGTCGGCCAACTGCAGTGAACCTATCAGATGCCACGACAAAACTCAATGAAGTCATATCTAAGGCTTCTGCTACAACTTCAAAGGCCGGGAGTGTTTTTCTGGCTTATGTGGAGGCTGCTGAAATTATGCTAGAGGATGATGTTGCCTCGAATAGAGCAATTGGTTCTTATGGAGCTAGTTTTATTCAACATCAAACAGAGAAACAGAAGCTCTGTTTTAACCCATTGCAACACCGAAAGGTAGAGGTGGGTAGTGCGTAG 522 0.433 MLQSICYELGSLQLLDQRKLALETIYLDIRDSTDGWNAIQDMVVRGAPAMLYVHCNSITFKQIKWKLANKPSDVVSLLQKKLDYLVSSRPTAVNLSDATTKLNEVISKASATTSKAGSVFLAYVEAAEIMLEDDVASNRAIGSYGASFIQHQTEKQKLCFNPLQHRKVEVGSA. 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03721 173 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 2 154 - -
Seca10g03721 173 FunFam Methylthioribose-1-phosphate isomerase 1 161 - -
Seca10g03721 173 Pfam Initiation factor 2 subunit family 44 153 IPR000649 GO:0044237
Seca10g03721 173 Gene3D - 1 157 IPR027363 -
Seca10g03721 173 SUPERFAMILY NagB/RpiA/CoA transferase-like 2 151 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03721 Seca-Chr10 72780779 72782066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03721 41 154 Eukaryotic Initiation Factors Gene Family AT2G05830 52.174 4.81e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03721 K08963 - gmx:100799311 207.608