Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03713 ATGGATGTAGGTGTTGTACCAGAATCTACAATCAGGGATGTTTCAAATTCCTACTCAAGACCCCACAAAGGGACAATTGACCTATTTTCTGGGCTTCCCATTCAGATGCTTTCCCATCTTACTCCAATGGACAGGGAGGCCAGAGTCCTAAGGTATAGGGAGAAAAAGAAGACAAGAAAATTTGAGAAGAGAATCAGGTATGCTTCAAGAAAGGCCTATGCAGAGAATAGACCTCGCATAAAAGGTCGATTTGCCAAGAGAACAGATGTAGAAGCTGAAGTGGATCAGATGTTCTCCACAACACTAATGACAGAAGTTGGATATAGCATTGTTCCCTCTTTCTGA 345 0.4232 MDVGVVPESTIRDVSNSYSRPHKGTIDLFSGLPIQMLSHLTPMDREARVLRYREKKKTRKFEKRIRYASRKAYAENRPRIKGRFAKRTDVEAEVDQMFSTTLMTEVGYSIVPSF. 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03713 114 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 2 105 IPR045281 GO:0009909
Seca10g03713 114 Pfam CCT motif 45 87 IPR010402 GO:0005515
Seca10g03713 114 ProSiteProfiles CCT domain profile. 45 87 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03713 Seca-Chr10 72460268 72460612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g03713 1 114 C2C2-CO-like Transcription Factor Family AT3G02380 68.421 8.70e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca10g03713 CCT 1.2e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03713 - K12135 lja:Lj0g3v0340909.1 189.889